immunoglobulin
There are 13 repositories under immunoglobulin topic.
immunomind/immunarch
š§¬ Immunarch: an R Package for Fast and Painless Exploration of Single-cell and Bulk T-cell/Antibody Immune Repertoires
smangul1/rop
The Read Origin Protocol (ROP) is a computational protocol that aims to discover the source of all reads, including those originating from repeat sequences, recombinant B and T cell receptors, and microbial communities.
Mangul-Lab-USC/TAIR
The Atlas of Immunoglobulin Repertoires (TheAIR)
snaketron/IgGeneUsage
Comparison of gene usage in immune repertoires under different biological conditions
Rashedul/CRIS
Construction of IHGV sequences from RNA-seq
antigenomics/segment-parser
A parser for immune receptor gene data, mainly IMGT references
imminfo/ymir
(Under development) Computational framework for probabilistic models of immune receptor assembling.
jmarsil/pygempick
Open Source python module to enable batch gold particle picking, filtering, processing & statistical modelling of TEM images produced by IGEM (immunogold electron microscopy).
laurazara/IgIDivA
IgIDivA (Immunoglobulin Intraclonal Diversification Analysis) is a purpose-built tool for the analysis of the intraclonal diversification process using high-throughput sequencing data. It is written in shiny R.
catg-umag/tandem-substitution-simulation
Simulation of false tandem substitutions from input sequencing data
NataliaKudr/IGV
Python and R Scripts for Statistical analysis of available immunogobulin variable genes
vladimirvig/ngs-ig
A pipeline for preprocessing and annotation of NGS immunoglobulin repertoire data.
smangul1/imrep-cloud
ImReP is a computational method for rapid and accurate profiling of the adaptive immune repertoire from regular RNA-Seq data.