literature-mining
There are 44 repositories under literature-mining topic.
anoopkcn/obsidian-reference-map
Reference and citation map for literature review and discovery
lisc-tools/lisc
Literature Scanner: Automated collection & analyses of the scientific literature.
krassowski/easy-entrez
Retrieve PubMed articles, text-mining annotations, or molecular data from >35 Entrez databases via easy to use Python package - built on top of Entrez E-utilities API.
ERPscanr/ERPscanr
Automated meta-analysis of event-related potential (ERP) research.
rafsanlab/ScrapPaper
A web scrapping method to extract journal information from PubMed and Google Scholar using Python.
Sathish-Vasudev/Article-Scraper
The program can be used to scrape the content from an article from web by an input of a set of URLs in a text file or a URL. This project uses newspaper3k and python-docx libraries. The output of this program will give a neatly modified Word Document in '.docx' format with the contents of the article.
karen-pal/borges
Datasets de los textos de cuentos de varios autorxs latinoamericanxs. Datasets benchmarks de distintas librerías de sentiment analysis en español sobre un corpus de borges.
jakelever/knowledgediscovery
Analysis code for knowledge discovery project
Yasin-VU/simple-python-bibliometrics
Easiest way to get your bibliometrics data ready and prepared
BlueBrain/nat
Python module to use the annotations created with NeuroCurator, for example in a Jupyter notebook.
v-i-s-h/neozot-py
get recommendations from arxiv based on your zotero library
SciCrunch/Antibody-Watch
Antibody Watch: Text Mining Antibody Specificity from the Literature
ac-jorellanaf/Google-Scholar-Scraper
A wrapper for the scholarly library to scrape Google Scholar entries through a keyword search, and add suggested DOIs using CrossRef with habanero.
cyschneck/Hydra
Named Entity Resolution, Extraction, and Linking of Lexically Similar Names
flppgg/maltego_academia
Set of Transforms for exploring the academic literature
MarissaSkud/Wordsworth
A web app (wordsworth.us) to identify anachronistic words & phrases in historical fiction by comparing it to fiction written during that era. Hackbright Fellowship final project.
Science-for-Nature-and-People/BibScan
R package to batch download PDFs from a Web of Science search
stephenjwilson/MeTeOR
MeTeOR, or the MeSH Term Objective Reasoning network, is a network representation of genes, drugs, and diseases built on MeSH terms curated by the National Library of Medicine
dujm/Literature_mining_PubMed
An app for myself to search PubMed literature
hhassanien/CRISP-DM-for-Augmented-Relevant-Literature-Search
CRISP-DM for Augmented Relevant Literature Search
InterruptorPt/algoritmos-pessoa
Consegue um algoritmo distinguir os vários heterónimos de Pessoa? Uma viagem por processamento de linguagem natural.
gaospecial/gut-microbiome-20yrs
Gut microbiome study (from 2000 to 2020)
shaunabanana/chi-11-years
Analyzing 11 years of CHI conference papers (2011-2021) with machine learning.
amberbiology/scribl
Semantic Capture of Relationships In Biological Literature (scribl)
baharsateli/Dissertation_Supplementary_Materials
Datasets, tools and results from my doctoral dissertation
HarnoorDhingra/Swanson-s-Model-for-Biomedical-Discoveries
Using NLP techniques, finding new relations and discoveries in Biomedical Literature(Vitiligo disease literature).
oda-hub/literature-to-facts
Extracting facts from publications
dmorn/lit
Literature crawler. Supports Elsevier's Scopus. Powered by charmbracelet/bubbletea
I3ALAQV/Literature_mining_of_contaminants_in_food_groups
Literature mining of 96 contaminants in 72 foods using FoodMine This work is part of DIETxPOSOME project of FOODinteract Research Team
IBCHgenomic/langchain-application
a langchain literature miner from pubmed
JDGiacomantonio-98/TA-FractureLab-ArchiveCatalog
This repo encapsulate a simple python procedure used for handling repetitive tasks during my Part-time Teaching Collaboration at Politecnico di Torino, winter 2020. I performed an indexing task of all gathered literature' paper material by Prof. A. Carpinteri during his carrer and now made available to students of Civil Engineering currently working on material fracture mechanics. The procedure allows compatibility of an Excel data-sheet, where data were manually stored, with the requested and all-precisely-formatted-as-requested Word document. In turn, this shall work as the index catalog of contents of the Laboratory of Fracture library here at Politecnico.
PREreview/getpreprints
Preprint metadata harvesting
rvdb7345/ArticleClassifier
Literature indexing using Graph Neural Networks and label-guided text embeddings.
seandstewart/iambic
Text processing, data extraction, and rendering library for Shakespearean text.