metabolic-networks
There are 19 repositories under metabolic-networks topic.
tubanlee/MM
Infer metabolic directions from moment differences of mass-weighted intensity distributions
cnapy-org/CNApy
An integrated visual environment for metabolic modeling with common methods such as FBA, FVA and Elementary Flux Modes, and advanced features such as thermodynamic methods, extended Minimal Cut Sets, OptKnock, RobustKnock, OptCouple and more!
sysbiolux/DCcov
Drug repositioning of single and drug combinations using Flux Balance Analysis.
Waschina/cobrar
COnstraint-based Reconstruction and Analysis (COBRA) of metabolic networks in R
Robaina/Netflowpy
A python tool to optimize chemical concentration trajectories in network-based chemical systems
sysbiolux/IDARE
IDARE - Multiomics Visualisation in Cytoscape
pregnault/samplelim
MCMC sampling algorithms for linear inverse models in R
sysbiolux/Herbal_drug_prediction
A workflow for ranking herbal drugs using metabolic modeling and flux variability anaylsis.
MateJozsaPhys/CNDinvestigation
Opportunities and challenges in partitioning the graph measure space of real-world networks
sysbiolux/MelanomaPaper
Consensus models of Bintener et al. 2023
sysbiolux/GliomaGEM
Glioma metabolic modelling for repurposing of single and combination drugs