metagenome-assembly
There are 14 repositories under metagenome-assembly topic.
ablab/spades
SPAdes Genome Assembler
smaegol/PlasFlow
Software for prediction of plasmid sequences in metagenomic assemblies
leylabmpi/DeepMAsED
Deep learning for Metagenome Assembly Error Detection
koszullab/metaTOR
Metagenomic binning based on Hi-C data
leylabmpi/resmico
Identifying misassemblies via deep learning
marbl/binnacle
Binnacle: Using Scaffolds to Improve the Contiguity and Quality of Metagenomic Bins
karkman/physalia_metagenomics
Environmental metagenomics, Spring 2021, Physalia Courses
microbiomedata/metaAssembly
Workflow for metagenome assembly
danielapierro/blobtools_tutorial
Create a blobplot of a holobiont assembly without a reference genome. Example code and data are provided.
leylabmpi/animal_gut_metagenome_assembly
Code associated with the Ley Lab animal gut metagenome assembly project
raw-lab/metaome_stats
Statistical package for metaome denovo assembly results.
lauralwd/Azolla_genus_metagenome
This project aims do describe and explore the metagenomes of fern species of the genus Azolla.
bfosso/SDATA_bio_Desc
Description of the bioinformatic workflow applied in Passaro et al 2019
reslp/binner
Run multiple metagenome filtering programs using Docker containers