morphometrics
There are 53 repositories under morphometrics topic.
pysal/momepy
Urban Morphology Measuring Toolkit
benchmark-urbanism/cityseer-api
Computational tools for urban analysis
MomX/Momocs
:dove: Morphometrics using R
vaipatel/morphops
Geometric Morphometrics in Python
alihashmiii/Elliptical-Fourier-Descriptors
elliptical fourier descriptors with and without lobe contributions
EcologicalTraitData/ETS
A Data Standard for Ecological Trait Datasets
noshita/ktch
Model-based morphometrics in Python
thomas-leduc/t4gpd
Set of tools based on Python, GeoPandas and Shapely to achieve urban geoprocessing
shaharkov/GPLmkBDMatch
A Matlab implementation accompanying the paper "Gaussian Process Landmarking on Manifolds".
millacarmona/morphospace
A package for people who can’t visualize morphospaces good and who wanna learn to do other geometric morphometrics stuff good too.
cjabradshaw/CoelacanthEvolution
Analyses of coelacanth morphometrics, disparity, phylogeny, and rate of evolution
alihashmiii/Force-Inference
implementation of the Bayesian Force Inference technique based on the work of Ishihara and Sugimura
MomX/MomX
:ring: Easily install and load MomX packages
timcdlucas/paleomorph
Geometric Morphometric Tools for Paleobiology
ElsevierSoftwareX/SOFTX-D-20-00032
Meander Statistics Toolbox (MStaT), is a packaging of codes developed on MATLAB, which allows the quantification of parameters descriptors of meandering channels (sinuosity, arc-wavelength, amplitude, curvature, inflection point, among other). To cite this software publication: https://www.sciencedirect.com/science/article/pii/S2352711021000194
flyconnectome/tools
Overview of neuroscience tools developed in the Fly Connectomics group (University of Cambridge) and the Jefferis lab (MRC-LMB)
MomX/Momacs
:hammer_and_wrench: Interactive acquisition of morphometrics data
psolymos/EDMAinR
Euclidean Distance Matrix Analysis in R
kiwijuliandale/DJI_PH4_LaserAltimeter
DJI Phantom 3/4 laser altimeter installation
Riverscapes/pyGUT
Geomorphic Unit Toolkit (GUT) - Python version
timcdlucas/EMMLi
A Maximum Likelihood Approach To The Analysis Of Modularity
alihashmiii/curvatureMeasure
for measuring curvature along the boundary of an image object
holsfastagz/morphostuff
A small Python package to aid morphometric analysis. Automates allometric correction and principal component analysis.
josegcpa/wbs-prediction
Code repository for project focusing on blood cell detection and diagnostic prediction from peripheral blood slides
MomX/Momecs
:bear: Morphometric (and multivariate) explorer controlled by shiny
MomX/Momit
:honey_pot: Definition and utils for .mom, a minimalist file format for morphometrics data.
seldenlab/perdiz3
Perdiz arrow points from Caddo burial contexts aid in defining discrete behavioral regions
alejandroescobar264/morfometria_craneos
Adquisición y Análisis de Datos Morfométricos Craneales Multidimensionales
asyafiqe/landmark-free-morphometry-docker
Docker container for Landmark-free Morphometry code from A landmark-free morphometrics pipeline for high-resolution phenotyping: application to a mouse model of Down syndrome paper
jdupej9000/warp9
Toolkit for geometric morphometry.
kedar-codes/hippo_morph
Current code for my hippocampal morphometry workflow, based on the hippodeep_pytorch segmentation program and the SlicerSALT shape analysis software.
kedar-codes/hippo_morph_old
The old, outdated code for my hippocampal morphometry pipeline.
rmk118/morphmat
Modeling Size at Maturity Using Morphometric Data
Dmirandae/DasybasisPhylogeny
The phylogenetic analysis of the _Dasybasis_ genus
phgaem/myrcia_spp_delim
Integrative species delimitation in the Myrcia neoobscura complex
rscherrer/allocorrect
An R package to correct for allometry in sexually dimorphic traits