neuroscience-methods
There are 98 repositories under neuroscience-methods topic.
AdaptiveMotorControlLab/CEBRA
Learnable latent embeddings for joint behavioral and neural analysis - Official implementation of CEBRA
asoplata/open-computational-neuroscience-resources
A publicly-editable collection of open computational neuroscience resources
neurolib-dev/neurolib
Easy whole-brain modeling for computational neuroscientists 🧠💻👩🏿🔬
MouseLand/rastermap
a visualization method for neural data
kylemath/EEGEdu
Interactive Brain Playground - Browser based tutorials on EEG with webbluetooth and muse
Mark-Kramer/Case-Studies-Python
An introduction to the practicing neuroscientist to data analysis in Python
JATOS/JATOS
Just Another Tool for Online Studies
tbrouns/eyestalker
Robust video-based eye tracking using recursive estimation of pupil characteristics
themattinthehatt/behavenet
Toolbox for analyzing behavioral videos and neural activity
SchwarzNeuroconLab/DeepLabStream
Closed-loop behavioral experiment toolkit using pose estimation of body parts.
shlizee/NeuroAI
NeuroAI-UW seminar, a regular weekly seminar for the UW community, organized by NeuroAI Shlizerman Lab.
bahanonu/imaging_tools
A table containing imaging analysis tools for biology, with a focus on calcium imaging.
yulewang97/ERDiff
[NeurIPS'23 Spotlight] Official Repo for "Extraction and recovery of spatio-temporal structure in latent dynamics alignment with diffusion models"
naplab/naplib-python
Tools and functions for neural data processing and analysis in python
PennLINC/CuBIDS
Curation of BIDS (CuBIDS): A sanity-preserving software package for processing BIDS datasets.
jajcayn/pygpso
Gaussian-Processes Surrogate Optimisation in python
BrainDynamicsUSYD/NeuroPattToolbox
MATLAB toolbox to automatically detect, analyze and visualize spatiotemporal patterns in neural population activity, developed by Dr. Pulin Gong's group at University of Sydney
kevmtan/electroCUDA
Robust electrophysiology tools with GPU acceleration
bsotomayorg/SpikeShip
SpikeShip: A method for fast, unsupervised discovery of high-dimensional neural spiking patterns.
ccli3896/RLWorms
Setting up C elegans as an RL environment.
phildean/SPM_fMRI_Example_Pipeline
Example pipeline for preprocessing, reading in behavioural files, first level and second level analysis
braph-software/BRAPH
Brain Analysis using Graph Theory
hochbaumGroup/HNCcorr
HNCcorr algorithm for neuron identification in calcium imaging datasets.
sahahn/BPt
The Brain Predictability toolbox (BPt), is a python based Machine Learning library designed primarily for tabular and neuroimaging specific neuroimaging data but can easily be generalized further.
dpshorten/CoTETE.jl
Continuous-Time Event-based Transfer Entropy
sync2brain/bossdevice-api-matlab
sync2brain's bossdevice RESEARCH Application Programmable Interface (API) for MATLAB
altunenes/Part-Whole
Swap facial landmarks(or whole facial area) for the part-whole task with OpenCV + dlib and MediaPipe.
AminAlam/Dynamics-of-Computational-Neuron-Models
Neural simulations using Brian2 Python Package
BrainDynamicsUSYD/BrainPalimpsest
Matlab toolbox to deconvolve BOLD-fMRI data. It produces the underlying spatiotemporal neural and hemodynamic activity
cirmuw/EvolutionOfCorticalShape
Data and tools from the publication "Evolution of Cortical Geometry and its Link to Function, Behaviour and Ecology" by Schwartz et al. for mapping values defined on cortical surfaces between species based on their phylogenetic relationship
NathanKlineInstitute/OEvent
Neural oscillation event detection and analysis
neuroinformatics-unit/rsp-vision
Analysis and visualization of calcium imaging data from retrosplenial cortex
sammosummo/Charlie2
Open-source neurocognitive test battery written in Python
soheilbr82/BluegrassWorkingMemory
A setup to evaluate working memory using EEG signals
aparek/detoks
Detection of K-complexes and Sleep Spindles (DETOKS) using Sparse Optimization for sleep EEG
nel-lab/mesmerize-napari
Mesmerize plugin for the napari viewer