nifti
There are 92 repositories under nifti topic.
libvips/libvips
A fast image processing library with low memory needs.
rordenlab/dcm2niix
dcm2nii DICOM to NIfTI converter: compiled versions available from NITRC
FNNDSC/ami
AMI Medical Imaging (AMI) JS ToolKit
nipy/nibabel
Python package to access a cacophony of neuro-imaging file formats
jibikbam/CNN-3D-images-Tensorflow
3D image classification using CNN (Convolutional Neural Network)
niivue/niivue
a WebGL2 based medical image viewer. Supports over 30 formats of volumes and meshes.
rordenlab/MRIcroGL
v1.2 GLSL volume rendering. Able to view NIfTI, DICOM, MGH, MHD, NRRD, AFNI format images.
Washington-University/workbench
Connectome Workbench
alexlaurence/NIfTI-Image-Converter
🖼 A lightweight neuroimaging .nii to .png converter for Matlab and Python users
fitushar/3D-GuidedGradCAM-for-Medical-Imaging
This Repo containes the implemnetation of generating Guided-GradCAM for 3D medical Imaging using Nifti file in tensorflow 2.0. Different input files can be used in that case need to edit the input to the Guided-gradCAM model.
bioimagesuiteweb/bisweb
This is the repository for the BioImage Suite Web Project
JuliaNeuroscience/NIfTI.jl
Julia module for reading/writing NIfTI MRI files
spm/spm
SPM (Statistical Parametric Mapping) - Development Version
jcreinhold/niftidataset
pytorch dataset class for reading and transforming NIfTI files
mfroeling/QMRITools
Processing and visualization tools for quantitative MRI data
tomaroberts/nii2dcm
nii2dcm: NIfTI to DICOM creation with Python
volBrain/AssemblyNet
AssemblyNet: 3D Whole Brain MRI segmentation pipeline
ITISFoundation/osparc-iseg
The Medical Image Segmentation Tool Set (iSEG) is a fully integrated segmentation (including pre- and postprocessing) toolbox for the efficient, fast, and flexible generation of anatomical models from various types of imaging data
anibalsolon/vscode-neuro-viewer
Check metadata and visualize neuroimages within VSCode.
Enet4/nifti-rs
Rust implementation of the NIfTI-1 format
ericspod/Eidolon
Biomedical Visualization and Analysis Framework
bhklab/med-imagetools
Transparent and reproducible medical image processing pipelines in Python.
lamyj/dicomifier
A medical image converter
brainlife/ezbids
A web service for semi-automated conversion of raw imaging data to BIDS
MahsaShk/MeshProcessing
Convert binary map to mesh. The binary map is in nifti format and the mesh is in stl file type.
pyvoxel/pyvoxel
Fast Pythonic data structures and tools for wrangling medical images.
neurolabusc/MRIcro
macOS Xcode GLSL Volume Render for NIfTI, Bio-Rad Pic, NRRD, Philips, ITK MetaImage, AFNI, Freesurfer, DICOM images.
ofgulban/iphigen
A command-line program for n-dimensional image enhancement and color balancing.
Washington-University/CiftiLib
C++ Library for reading and writing CIFTI-2 and CIFTI-1 files
hanayik/niivue
a WebGL2 based NIFTI volume viewer.
lamyj/erwin
Quantitative MRI toolbox in Python
brainglobe/imio
Loading and saving of image data.
deepc-health/nekton
A python package for DICOM to NifTi and NifTi to DICOM-SEG and GSPS conversion
plwp/Nifti.NET
A basic library for reading, writing and manipulating NIfTI files.
dmascali/BrainSlicer
Visualize and print volumetric brain data
okieraised/gonii
Standalone NIfTI file parser