non-model-species

There are 7 repositories under non-model-species topic.

  • sk-sahu/sig-bio-shiny

    A standalone interactive application for detecting biological significance on a set of genes

    Language:R40389

  • PalMuc/TransPi

    TransPi – a comprehensive TRanscriptome ANalysiS PIpeline for de novo transcriptome assembly

    Language:Nextflow2665514
  • AllEnricher

    zd105/AllEnricher

    A comprehensive gene set function enrichment tool for multiple species.

    Language:Shell13153

  • nat2bee/repetitive_elements_pipeline

    Pipeline to identify repetitive elements on non-model species genomes.

    Language:R4201

  • tools4plant-omics/PABLOG

    PABLOG: a Primer Analysis tool using a Bee-Like approach on Orthologous Genes

    Language:Python2001

  • RubenVG02/NonModelGOToolkit

    This project features a pipeline for Gene Ontology (GO) enrichment analysis on candidate genes with functional transcriptome annotations. It identifies enriched Biological Processes (BP), Cellular Components (CC), and Molecular Functions (MF), using R and Python to create 2D treemaps and interactive 3D visualizations of GO terms.

    Language:Python1100

  • CBFLivUni/mapping_and_enrichment

    Collection of code that maps IDs and does enrichment.

    Language:R21