ohdsi
There are 30 repositories under ohdsi topic.
dermatologist/pyomop
Python package for managing OHDSI clinical data models. Includes support for LLM based plain text queries!
BiomedSciAI/DPM360
Repository for Disease Progression Modeling workbench 360 - An end-to-end deep learning model training framework in python on OMOP data
thepanacealab/OHDSIananke
OHDSI Ananke - A Tool for Mapping Between OHDSI Concept Identifiers to Unified Medical Language System (UMLS) identifiers
RADar-AZDelta/Rabbit-in-a-Blender
An ETL pipeline to transform your EMP data to OMOP.
BIH-MI/ohdsi-compliance
A set of document templates facilitating efficient implementation and operation of an OMOP/OHDSI installation
JuliaHealth/OMOPCommonDataModel.jl
Pure Julia implementation of the OMOP Common Data Model (CDM)
kclhi/ohdsi
:whale2: OHDSI stack Docker configuration
OHDSI/OpenSourceCommunity
Repository for the OHDSI Open Source Community workgroup
onefact/healthcare-data
Examples of exploring synthetic healthcare data from the Agency for Healthcare Research and Quality in the United States Department of Health and Human Services, and MITRE Corporation.
E-Health/gocdm
GORM models and APIs for CDM v 6.0
NajiaAhmadi/Benchmarking-Analysis-of-PLP-vs-MLR3
This repo contains analysis performed for paper "A comparative patient-level prediction study in OMOP CDM – insights from study on synthetic data".
ohdsi-studies/MusculoskeletalAEsAfterAIs
A Population level estimate (PLE) cohort study with prior A Cohort Diagnostics study to determine the feasibility using non-identifiable data mapped to the OHDSI Observational Medical Outcomes Partnership (OMOP) Common Data Model (CDM) to evaluate the risk of adverse musculoskeletal events in post-menopausal women taking AI compared to tamoxifen to treat breast cancer.
thehyve/OHDSI-Atlas
ATLAS is an open source software tool for researchers to conduct scientific analyses on standardized observational data
thehyve/ohdsi-etl-prias
Transformation from PRIAS to the OMOP CDM
ablack3/understanding_cohort_era_logic
Some scratch work looking at cohort_era logic in OHDSI
edencehealth/sqlalchemy_omopcdm
SQLAlchemy Declarative Mapping Models for OHDSI OMOP CDM
krashr-ds/healthcare-sql
OMOP cohort creation SQL
peterbanda/ehr-ohdsi-processor
OHDSI data processor used to generate various features from EHRs (Electronic Health Records). It was developed and deployed for EHR Morbidity DREAM Challenge.
jaygee-on-github/The-APHRC-LSHTM-MUBAS-IDSR-Project
During the pandemic countries in the African region used data systems they built on top of the WHO Integrated Disease Surveillance and Response (IDSR) framework to track COVID-19 and formulate public health responses. Our IDSR project wrangles these data systems into instances of a common data model and conducts network research on top of them.
NajiaAhmadi/OMOP-content-deletion
Deletion of unwanted content from OMOP CDM
RADar-AZDelta/lib_airflow
Custom Airflow operators and hooks, that help to upload our raw hospital data to Google Cloud.
siirsu/OHDSI2023
Abstract for OHDSI European Symposium 2023
ablack3/OHDSI-search
A repository for hosting an OHDSI Google Search webpage
alondhe/OhdsiQuarto
Repository of useful Quarto documents for OHDSI projects
dermatologist/fhirform-ohdsi
FHIR server that transforms QuestionnaireResponses to OHDSI OMOP CDM.
edencehealth/ohdsi-glue
tool to facilitate the setup and ongoing maintenance of OHDSI & EHDEN tool deployments
kant2002/cdm
The SQL Server project for OHDSI database CDM format
thepanacealab/OHDSI2RDF
OHDSI Vocabulary to RDF converter