/OMOP-content-deletion

Deletion of unwanted content from OMOP CDM

Primary LanguagePython

OMOP CDM Content deletion

This script is used to delete the content of certain columns in certan tables of OMOP CDM.

Required packages

  • sqlalchemy
  • psycopg2

Fill in the database information in the scrip:

  • db_host = "Your database host"
  • db_port = "Your port"
  • db_name = "Your database name"
  • db_user = "You admin name"
  • db_password = "Your admin password"

Run the scrip in Terminal using the following commond:

  • python omop-deletion-scrip.py