orthology-assignments
There are 6 repositories under orthology-assignments topic.
eggnogdb/eggnog-mapper
Fast genome-wide functional annotation through orthology assignment
JLSteenwyk/orthofisher
a broadly applicable tool for automated gene identification and retrieval
univieCUBE/deepnog
Protein orthologous group assignment with deep learning
JLSteenwyk/orthosnap
a tree splitting and pruning algorithm for retrieving single-copy orthologs from gene family trees
fethalen/phylopypruner
Tree-based orthology inference with functionality for reducing contamination
fethalen/orthoquoll
A stand-alone tool for evaluating simple statistics of orthologs