eggnogdb/eggnog-mapper

Issues

• eggNOG-mapper web UP

  #511 opened 6 months ago by Cantalapiedra
  18

• Error running diamond: Length sorting reference

  #507 opened 7 months ago by royercj
  8

• Low GO Annotation Yield from Bacterial Genome using eggNOG-mapper

  #530 opened 3 months ago by petemeng
  0

• Missing queries

  #529 opened 3 months ago by jeskef
  0

• download_eggnog_data.py: unreadable yellow text on white background

  #528 opened 4 months ago by knarrff
  0

• errors while installing the dependencies

  #526 opened 4 months ago by faithoni
  1

• deploy local web

  #527 opened 4 months ago by dearyangyu
  0

• KO not mapping to appropriate KEGG reaction

  #525 opened 4 months ago by Amanda-Biocortex
  0

• Doubts about Eggnog database and Eggnog mapper

  #524 opened 5 months ago by sarpiens
  0

• [BUG] wrong version installed when using conda

  #521 opened 5 months ago by rpeguil
  3

• EggNog evalue and score

  #518 opened 5 months ago by Zara-Ahmad
  1

• distutils deprecated in python 3.12+

  #516 opened 6 months ago by kbseah
  1

• Cannot include both --query_cover and --subject_cover in my search.

  #514 opened 6 months ago by KPapac
  5

• Issue: shutil.SameFileError in wrap_up Method

  #513 opened 6 months ago by brchn6
  2

• Partial descriptions in eggNOG db

  #520 opened 5 months ago by tgurbich
  1

• server stopped working since 6/6/2024

  #515 opened 5 months ago by Venetios
  4

• eggNOG-mapper online server have problem

  #517 opened 5 months ago by True-Create
  3

• 不能用了

  #519 opened 5 months ago by xiaolinzi000
  0

• eggnog is not working

  #522 opened 5 months ago by purushothaman1981
  1

• How long will eggnogdb will open?

  #523 opened 5 months ago by kimjinou
  1

• Eggnog mapper web server is not working

  #506 opened 7 months ago by ahmaduaf
  12

• GOs column - easy way to visualise/chart?

  #495 opened 10 months ago by vebaev
  1

• Weird GO terms of some genes occurred in annotation

  #505 opened 7 months ago by Prunoideae
  6

• Server Down

  #496 opened 10 months ago by KyleMondron
  2

• filter out irrevelent KEGG pathways

  #492 opened a year ago by Azurelan35
  4

• How to change the diamond software path that mapper.py runs?

  #490 opened 7 months ago by mondayz11
  2

• GPU

  #497 opened 7 months ago by helbacsb
  1

• Setting custom database directory for download_eggnog_data.py does not work with custom directory

  #499 opened 8 months ago by ndeimler99
  1

• Typing error in eggnog-mapper/eggnogmapper /emapper.py

  #501 opened 8 months ago by Methanoutput
  1

• Question about KEGG_pathway result

  #502 opened 7 months ago by HuangLoong
  2

• download_eggnog_data.py -M EOS error

  #500 opened 7 months ago by andymuan
  2

• Mapping eggnog with other annotations

  #503 opened 7 months ago by matthpich
  2

• issue using emapper.py: "Error running diamond: Loading reference sequences..."

  #493 opened a year ago by AMosca96
  2

• Diamond error

  #494 opened a year ago by kmanoharan01
  2

• Question: How to generate .faa with Eggnog?

  #508 opened 7 months ago by cmkobel
  1

• diamond: cannot execute binary file

  #510 opened 7 months ago by jcarlospana15
  1

• .annotations has only its title，no content、

  #504 opened 7 months ago by lucio401
  8

• 502 bad gateway

  #509 opened 7 months ago by linruoran1999
  5

• Issue when using mmseqs instead of diamond: "Error running 'mmseqs search': - Aminoacid"

  #479 opened a year ago by plaquette
  2

• the status showed "Done", but no result can be downloaded, using online eggnog

  #480 opened a year ago by sqwwww
  4

• Local vs. online resource

  #485 opened a year ago by liamfriar
  2

• Eggnog V6 database

  #491 opened a year ago by susheelbhanu
  1

• Problem running emapper.py and download bact arch viruses

  #489 opened a year ago by xjhzjucas
  1

• Are the online resources down?

  #488 opened a year ago by adrienchaton
  2

• Which version of pfam, kegg, cazy etc is used?

  #487 opened a year ago by yeastbeast
  1

• Assign queries without DIAMOND hit to eggNOG groups using HMM

  #486 opened a year ago by sgarciah12
  1

• Taxonomic table for extraction of certain levels

  #484 opened a year ago by ts-dangelo
  1

• extract best OG (v2.1.12)

  #483 opened a year ago by algrgr
  4

• Error: annotation went wrong for pfam alignment in parallel

  #482 opened a year ago by zhaoc1
  7

• There was an error retrieving eggnog-mapper DB data: disk I/O error

  #481 opened a year ago by CoderWenmingxing
  3