susheelbhanu
Jack of all trades, Master of none.. Interested in everything in the sun.. The `accidental bioinformatician`..
UK Centre for Ecology & HydrologyUnited Kingdom
Pinned Repositories
MetaComp
NOMIS_ENSEMBLE
16S_DADA2
Analysis of 16S sequencing data via `DADA2` using a `snakemake` workflow
ceh_moleco
lab_guidelines_repo
gRodon
Snakefile and scripts for running gRodon
imp_docs
Folder containing config file and launcher scripts for IMP
kraken2
# Kraken
learn-genomics-in-unix
An interactive course on learning genomics/bioinformatics tasks in Linux.
Scripts
Collection of various scripts
snakemake-tutorial
Tutorial to getting started with the Snakemake workflow manager
susheelbhanu's Repositories
susheelbhanu/kraken2
# Kraken
susheelbhanu/gRodon
Snakefile and scripts for running gRodon
susheelbhanu/imp_docs
Folder containing config file and launcher scripts for IMP
susheelbhanu/learn-genomics-in-unix
An interactive course on learning genomics/bioinformatics tasks in Linux.
susheelbhanu/rock_biofilm_amr
susheelbhanu/16S_DADA2
Analysis of 16S sequencing data via `DADA2` using a `snakemake` workflow
susheelbhanu/ceh_moleco
lab_guidelines_repo
susheelbhanu/mice_multiomics_mmrrc
metaG_metaT analyses for two gut microbiota profiles established by Ericsson et al. at the Mutant Mouse Resource and Research Center at the University of Missouri-Columbia (USA)
susheelbhanu/Scripts
Collection of various scripts
susheelbhanu/snakemake-tutorial
Tutorial to getting started with the Snakemake workflow manager
susheelbhanu/bcbb
Incubator for useful bioinformatics code, primarily in Python and R
susheelbhanu/busi_research_profile
susheelbhanu/dada2_to_picrust
susheelbhanu/F1000_workflow
susheelbhanu/FlashWeave.jl
Inference of microbial interaction networks from large-scale heterogeneous abundance data
susheelbhanu/genome-bin-tools
Interactive tools for metagenome visualization and binning in R
susheelbhanu/hmm_updater
Automated HMM creation with Uniprot sequences using Rhea or EC as clustering IDs
susheelbhanu/METABOLIC
A scalable high-throughput metabolic and biogeochemical functional trait profiler
susheelbhanu/microbiome-analysis
CODA microbiome-analysis using aldex2, pylofactorisation
susheelbhanu/networktutorials
Repository for presentations and network inference tutorials
susheelbhanu/nomis_pipeline
susheelbhanu/Planets_SoftwareCarpentry
Mars project exercise
susheelbhanu/QIIME2_PICRUSt_batch
Batch script for running Qiime2 all the way through to making a file for PICRUSt. Additional files for PICRUSt will be added later
susheelbhanu/roary2fripan
Formats Roary output for viewing in FriPan
susheelbhanu/skills-introduction-to-github
My clone repository
susheelbhanu/snakemake-workflow-gsea
A Snakemake Workflow for Gene Set Enrichment Analysis
susheelbhanu/sra_read_downloader
A handy script for downloading reads from any kind of accession from the SRA.
susheelbhanu/tests1
susheelbhanu/Unix_Training
susheelbhanu/viralMetagenomicsPipeline
Pipeline for metagenomic community analysis using DNA isolated from virus-like particles