paralogs

There are 10 repositories under paralogs topic.

thierrygosselin/radiator
RADseq Data Exploration, Manipulation and Visualization using R
Language:HTML59 13 17523
Rinoahu/SwiftOrtho
A high performance tool to identify orthologs and paralogs across genomes.
Language:Python27 3 1511
edgardomortiz/Captus
Assembly of Phylogenomic Datasets from High-Throughput Sequencing data
Language:Python21 5 165
tseemann/noary
🍣 🦐 A lightweight nucleotide bacterial ortholog clustering tool
Language:Perl7 3 12
ChrisCreevey/clan_check
Check trees for compatibility with defined groupings in unrooted trees - "The incontestable clan test"
Language:C4 2 12
V-Z/hybseq-scripts
Set of scripts to process HybSeq target enrichment HTS data (on computing grids).
Language:Shell4 2 03
vivekruhela/miRPipe
miRPipe: Open source RNA-Seq bioinformatics analysis docker for identification of miRNAs and piRNAs
Language:Python4 2 12
Arkadiy-Garber/ParaHunter
Identification of gene paralogs in genomes, and calculation of dS and dN/dS values for paralogous gene pairs
Language:Python3 3 20
lyy005/Aphid_AL4_chromosome_assembly
The analytical pipeline of the AL4 strain genome
Language:R2 2 04
lvn3668/paralogIdentification
Wrapper script that calls formatdb on nr database and then runs blastall against formatted db and parses the output.
Language:Perl1 1 0