relative-abundances

There are 5 repositories under relative-abundances topic.

  • RawHash

    CMU-SAFARI/RawHash

    RawHash can accurately and efficiently map raw nanopore signals to reference genomes of varying sizes (e.g., from viral to a human genomes) in real-time without basecalling. Described by Firtina et al. (published at https://academic.oup.com/bioinformatics/article/39/Supplement_1/i297/7210440).

    Language:C508105

  • Russel88/DAtest

    Compare different differential abundance and expression methods

    Language:R508239

  • jaeyunsung/GMHI_2020

    Scripts for reproducing results shown in Gupta VK et al. "A Predictive Index for Health Status using Species-level Gut Microbiome Profiling". Nature Communications, 2020. https://doi.org/10.1038/s41467-020-18476-8.

    Language:R322616

  • oschakoory/RiboTaxa

    RiboTaxa: combined approaches for rRNA genes taxonomic resolution down to the species level from metagenomics data revealing novelties.

    Language:Shell7150

  • iliapopov17/The-shadow-of-HIV

    šŸ¦ Research project in Bioinformatics Institute 2023-2024

    Language:Jupyter Notebook3101