research-compendium

Pakillo/template

A template for data analysis projects structured as R packages (or not)

jhollist/manuscriptPackage

Template for writing manuscripts as an R package

cboettig/noise-phenomena

:notebook: Ecology Letters review paper: Noise-driven phenomena in population biology

cboettig/nonparametric-bayes

:notebook: Non-parametric Bayesian Inference for Conservation Decisions

FRBCesab/rcompendium

:package: Create a package or compendium structure

research-compendium/how-to-read-a-research-compendium

"How to Read a Research Compendium" - based on S. Keshav's "How to Read a Paper"

mbjoseph/neuralecology

Code for the paper "Neural hierarchical models of ecological populations"

pat-s/2019-feature-selection

Research project

earowang/thesis

PhD thesis

openplantpathology/Reproducibility_in_Plant_Pathology

A systematic/quantitative review of articles, which provides a basis for identifying what has been done so far in the field of plant pathology research reproducibility and suggestions for ways to improving it.

annakrystalli/rrtools-repro-research

Tutorial on Reproducible Research in R with rrtools

benmarwick/mjbtramp

FRBCesab/datatoolbox

:mortar_board: Data Toolbox Training

boettiger-lab/pomdp-intro

:notebook: A separate repo for first pomdp paper (AmNat)

benmarwick/1989-excavation-report-Madjedbebe

Text, data and code to accompany the analysis of the 1989 excavation data

cboettig/pdg_control

:notebook: Pretty Darn Good Control: applications in optimal control

brazil-data-cube/wlts-paper

Research compendium of the article: A plataform for land use and land cover data integration and trajectory analysis

everhartlab/sclerotinia-366

Analysis for "Population structure and phenotypic variation of *Sclerotinia sclerotiorum* from dry bean (*Phaseolus vulgaris*) in the United States"

mbjoseph/wildfire-extremes

Spatiotemporal modeling of wildfire extremes

C-C-A-A/CologneProtocol-R

Research compedium for "Approaching Prehistoric Demography: Proxies, Scales and Scope of the Cologne Protocol in European contexts" including a manual of the Cologne Protocol

research-compendium/research-compendium.github.io

Website repository

annakrystalli/rrcompendiumDTB

Full Reproducible Research Compendium produced with rrtools including travis, dockerfile & binder setup

benmarwick/teaching-replication-in-archaeology

This repository contains the data and code for our paper: "How to use replication assignments for teaching integrity in empirical archaeology"

rgayler/scorecal_CSCC_2019

"scorecal - Empirical score calibration under the microscope" presentation given at Credit Scoring & Credit Control XVI, Edinburgh, UK, 2019-08-30

annakrystalli/rrcompendium-complete

Complete example of compendium produced during rrtools: reproducible research in R workshop

bbartholdy/byoc-starch

Research compendium for 'Investigating Biases Associated with Dietary Starch Incorporation and Retention with an Oral Biofilm Model.'

joeroe/SWAsiaNeolithicFounderCrops

Data and code for Arranz-Otaegui & Roe (2023), "Revisiting the concept of the 'Neolithic Founder Crops' in southwest Asia'

benmarwick/mjbnaturepaper

cboettig/decisions-vs-transients

:notebook:

MartinHinz/bayesian.demographic.reconstruction.2022

Research compendium for ‘Bayesian inference of prehistoric population dynamics from multiple proxies: a case study from the North of the Swiss Alps’

Mateusz-Grzelinski/program-synthesis-documentation

Many resources about program synthesis

trhermes/isotopes.sheep.goat.tianshan

Research compendium for ‘Carbon and oxygen stable isotopic evidence for diverse sheep and goat husbandry strategies amid a Final Bronze Age farming milieu in the Kyrgyz Tian Shan’

dalmolingroup/neurotransmissionevolution

Research compendium for Viscardi et al, 2020.

RPanczak/ISPM_excess-mortality-historical

Tracking century of excess mortality in Switzerland 🇨🇭, Sweden 🇸🇪 & Spain 🇪🇸

stonerlab/PIQSD-SingleSpinBz

Sources for: Numerical Simulations of a Spin Dynamics Model Based on a Path Integral Approach