scg4
There are 4 repositories under scg4 topic.
adiamb/IMPUTE-PIPELINE-MIGNOT-LAB
A pipeline to impute plink genotypes to 1000 Genomes phase 1
adiamb/IMPUTE_PIPELINE_MIGNOT_SLURM_VER
This pipeline is a slurm version of the IMPUTE_PIPELINE
adiamb/SNPTEST-Scripts
A python scripts to split imputed oxford genotype probabilities into chunks for parallel computation using snptest and update sample file needed for analysis