scrna-pipeline

There are 5 repositories under scrna-pipeline topic.

  • zhanghao-njmu/SCP

    An end-to-end Single-Cell Pipeline designed to facilitate comprehensive analysis and exploration of single-cell data.

    Language:R363812380

  • AntonioDeFalco/SCEVAN

    R package that automatically classifies the cells in the scRNA data by segregating non-malignant cells of tumor microenviroment from the malignant cells. It also infers the copy number profile of malignant cells, identifies subclonal structures and analyses the specific and shared alterations of each subpopulation.

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  • mckellardw/scMuscle

    The Cornell Single-Cell Muscle Project (scMuscle) aims to collect, analyze and provide to the research community skeletal muscle transcriptomic data

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  • luglilab/NaCl-enhances-CD8-T-cell-effector-functions-in-cancer-immunotherapy

    Integration analysis with Scanpy and scRNAseq TME from blueprint

    Language:Jupyter Notebook2200
  • scRNASeq

    OlivierRaineteauSBRI/scRNASeq

    Repo linked to our recent publication in Science Advances

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