seqan

There are 11 repositories under seqan topic.

seqan/seqan
SeqAn's official repository.
Language:C++477 42 779171
seqan/seqan3
The modern C++ library for sequence analysis. Contains version 3 of the library and API docs.
Language:C++409 25 76983
seqan/lambda
LAMBDA – the Local Aligner for Massive Biological DatA
Language:C++77 13 13620
smehringer/SViper
Swipe your Structural Variants called on long (ONT/PacBio) reads with short exact (Illumina) reads.
Language:C++32 5 108
iosonofabio/seqanpy
Fast pairwise sequence alignment using SeqAn, in Python.
Language:C++13 4 17
UDC-GAC/PATO
PATO: high PerformAnce TriplexatOr is a high performance tool for the fast and efficient detection of triple helices and triplex features in nucleotide sequences
Language:C++9 4 20
biocpp/biocpp-io
BioC++ Input/Output library
Language:C++8 4 55
brendane/bltools
Unix-style text manipulation tools for biological sequence data.
Language:C++0 2 00
no-materials/SeqAnRef
Common How-Tos using the NGS C++ library SeqAn
Language:C++0 2 00
martinjvickers/write_sam_from_stream
Writing a SAM file from a stream of data
Language:C++2 0
qPCR4vir/seqan3
The modern C++ library for sequence analysis. Contains version 3 of the library and API docs.
Language:C++2 0