sequence-search

There are 12 repositories under sequence-search topic.

soedinglab/MMseqs2
MMseqs2: ultra fast and sensitive search and clustering suite
Language:C1.8k 30 938240
soedinglab/hh-suite
Remote protein homology detection suite.
Language:C590 24 333145
rcedgar/muscle
Multiple sequence and structure alignment with top benchmark scores scalable to thousands of sequences. Generates replicate alignments, enabling assessment of downstream analyses such as trees and predicted structures.
Language:C++250 6 8025
shenwei356/LexicMap
LexicMap: efficient sequence alignment against millions of prokaryotic genomes
Language:Go179 3 108
soedinglab/MMseqs2-App
MMseqs2 app to run on your workstation or servers
Language:Vue96 6 4428
proteinevolution/Toolkit
The MPI Bioinformatics Toolkit
Language:Scala69 6 42714
Kingsford-Group/kourami
Kourami: Graph-guided assembly for HLA alleles
Language:Java38 15 3712
krzjoa/sciquence
Time series & sequence processing in Python 🗠
Language:Python5 4 22
TravisWheelerLab/bagel
A framework for benchmarking sequence search tools
Language:Python1 3 4
Abdelrahman-Hussain/sequenceSet
implement Sequence setof the Btree.
Language:C++0 0
ggirelli/seq-lib-gg
Base librarys for sequencing data analysis.
Language:R1 0
itoshkov/multi-search
Multi-search Java library
Language:Java1 0