silva

There are 13 repositories under silva topic.

epruesse/SINA
SINA - Reference based multiple sequence alignment
Language:C++41 7 894
pirovc/multitax
Python package to obtain, parse and explore biological taxonomies (GTDB, NCBI, Silva, Greengenes, OTT)
Language:Python40 4 63
Arkadiy-Garber/Taxonsluice
Reference-based, heuristic algorithm for identification of potential contaminants in mothur-formatted OTU tables
Language:Python2 1 01
k8hertweck/FieldLabComparison
microbiome analysis of ant colonies
Language:Shell2 2 181
SilvaTechB/s-ilva
FAST WHATSAPP BOT AND EASY DEPLOY 💃 CREATE BY Silva💜 if it works don't fix it
Language:JavaScript2 0 04
adrianagiongo/RhizoWheat-ms1
Workflow and R scripts for Giongo et al. (2024)
Language:R0 1 00
GSimas/gsimas.github.io
♜Personal Github Webpage
Language:HTML0 1 30
mmtechslv/PhyloMAF
Next Generation Phylogenetic Microbiome Analysis Framework
Language:Python0 0 00
mmtechslv/taxamatcher
Correlates target taxonomy(i.e consensus lineages) with a reference taxonomy such as Greengenes, SILVA, etc.
Language:Python0 0 00
Silvacosta/gustavo
Language:HTML0 1 00
adrianagiongo/RhizoWheat-ms2
Workflow and R scripts for Braun-Kiewnick et al. (2024)
Language:R
aortiz24/FieldLabComparison
microbiome analysis of ant colonies
Language:Shell1 0
glickmac/OTU_Groupings
Language:Shell2 0