single-molecule-imaging
There are 13 repositories under single-molecule-imaging topic.
sheng-liu/sojourner
Statistical analysis of single molecule trajectories. (NB: The Sojourner.Pro featuring machine learning analysis is in the making, sign up on sojourner website for release: also, I am open for freelancing till the end of the pandemic, checkout the website for details).
hatzakislab/SEMORE
SEMORE is a multi-layered density-based clustering module to dissect biological assemblies and a morphology fingerprinting module for quantification by multiple geometric and kinetics-based descriptors.
biswa-mahanta/Actin-Filament-Bundling-Analysis
MATLAB codes developed in Courtemanche lab at University of Minnesota for automating analysis of actin filament properties from single molecule microscopy images.
takushim/tanitracer
Python toolkit for 2D single-particle tracking (SPT) and reconstruction of super-resolution images.
drbeiliu/beiliu
Bei Liu's personal website
fregat17/ONi-THE-WAY
A useful tool for working with Oxford Nanoimager microscope single-molecule localization data.
HarrisonGoldwyn/mispolarization
Jupyter implementations of various features in the `misloc_package`, predicting mispolarization and mislocalization in plasmon-enhanced single-molecule imaging.
imrahilias/biophysics
All this is part of my Projektarbeit (student project) @ TU Wien 2021
takushim/momomagick
Python toolkit for 2D/3D image processing using CPU or GPU
takushim/momotrack
A GUI application to assist manual object tracking in 2D/3D time-lapse images
bencardoen/Colocalization.jl
Colocalization metrics and distances for images or their sparse representations.
rkurre/SPT-Simulator
Matlab software for simulation of two-dimensional single particle tracking (SPT) data sets.
shalinshah1993/temporalDNAbarcodes
A MATLAB suite implementing computer vision pipeline to extract information from the noisy TIRF microscopy data (image stack)