sir-model

There are 193 repositories under sir-model topic.

  • graph-theory

    je-suis-tm/graph-theory

    Julia and Python complex system applications in ecology, epidemiology, sociology, economics & finance; network science models including Bianconi-Barabási, Barabási-Albert, Watts-Strogatz, Waxman Model & Erdős-Rényi; graph theory algorithms involving Gillespie, Bron Kerbosch, Ramsey, Bellman Ford, A*, Kruskal, Borůvka, Prim, Dijkstra, DSatur, Randomized Distributed, Vizing, Topological Sort, DFS, BFS

    Language:Jupyter Notebook32911291
  • covid19-sir

    lisphilar/covid19-sir

    CovsirPhy: Python library for COVID-19 analysis with phase-dependent SIR-derived ODE models.

    Language:Python109550444
  • simulation_virus_covid-19

    antonin-lfv/simulation_virus_covid-19

    Simulating epidemics using Python

    Language:Python523115

  • mattravenhall/BasicSIRModel

    A simple SIR model in Python

    Language:Python223015

  • PingEnLu/Time-dependent_SIR_COVID-19

    Codes for the paper "A Time-dependent SIR model for COVID-19 with Undetectable Infected Persons"

    Language:Python182011

  • mjg211/phaseR

    Development version of phaseR, an R package for phase plane analysis of one- and two-dimensional autonomous ODE systems

    Language:R15293
  • MetaWards

    metawards/MetaWards

    MetaWards disease metapopulation analysis and modelling software. Professional geographical SIR model with a flexible plugin architecture to support complex scenario modelling

    Language:Python133546
  • covid-19

    p-j-r/covid-19

    Stochastic SIR models; adding age-structures and social contact data for the spread of covid-19. Lattice model for identifying and isolating hotspots. This has been further developed into a network(graph) of multiple clusters(lattices) and tracing the infection in such a population.

    Language:Jupyter Notebook13348

  • metalcorebear/Mesa-SIR

    A Mesa-based ABM library for epidemiological (SIR) modeling.

    Language:Python10409

  • paramrathour/Nonlinear-Dynamics

    Files related to my Summer of Science Report on Nonlinear Dynamics

    Language:TeX10102

  • SilverLinings89/VirusSimulator

    A virus simulation for pandemics based on the SIR-network concept.

    Language:TypeScript10304

  • nishi1612/Modelling-and-Simulation

    CS302 Modelling and Simulation Weekly Assignments in python based on modelling different systems - SARS, Malaria, SIR

    Language:Jupyter Notebook9112

  • parulm/spread_lockdown

    A GitHub repo for the generation of a network model to represent society with various components, the spread of the disease on this network, and the calculation of reproduction number on these simulation results.

    Language:Python9103

  • maufadel/SIR_on_Gnutella

    Simulation of a SIR Epidemic process on the Gnutella p2p network on Python

    Language:Jupyter Notebook8101

  • adbecker/tsiR

    tsiR: An R package for time-series Susceptible-Infected-Recovered models of epidemics

    Language:R7325

  • open-sir/open-sir

    Python SIR-x model implementation

    Language:Python6598

  • acrooks2/Four-Disease-Models

    Comparing four modeling approaches: System Dynamics, Agent-based Modeling, Cellular Automata, and Discrete Event Simulation using a SIR model as an example

    Language:NetLogo5302

  • fudab/fudab.github.io

    Official website @ Github with content including COVID-19.

    Language:HTML5100

  • spang-lab/TenSIR

    SIR model parameter estimation using a novel algorithm for differentiated uniformization.

    Language:Python5001

  • tjxie/KUX_PandemicMacro

    Macroeconomic dynamics and reallocation in an epidemic

    Language:MATLAB5215

  • UofUEpiBio/epiworldR

    A general framework for quick epidemiological ABM models

    Language:R5183
  • sirsimx

    lorenzofelletti/sirsimx

    Simple SIR Model Simulation

    Language:JavaScript4314

  • MatteoM95/Network-Dynamics-and-Learning

    Homework and exercises from course Network Dynamics and Learning

    Language:Jupyter Notebook4206

  • uros-bojanic/epidemic-modelling

    [Computer Modeling] SIR/SIRS/SIRQ/ISIR/SEIR compartmental models for numerical epidemic modelling in MATLAB.

    Language:MATLAB4100

  • cgado12/disseminationSimulator

    A visualization in processing (java) that simulates how things spread inside a network.

    Language:Processing3300

  • CNC-IISER-BHOPAL/Disease-Models-with-Python-Mesa

    This repository is meant as a facilitator for all those who want to learn agent based disease modelling using the mesa framework in python. When I started out, there were too few examples for this on the net. Thankful to the community helping me learn, here I will share some of my insights.

    Language:Jupyter Notebook3200

  • Cobord/Simple-ODEs

    Various ODEs

    Language:Jupyter Notebook3200

  • Forcoa-NET/SirModelShowCase

    SIR model example with visualization on Karate Club network.

    Language:Jupyter Notebook3200

  • migduroli/covid-uk-variant

    More than a year after the onset of the CoVid-19 pandemic in the UK: lessons learned from a minimalistic model capturing essential aspects including social awareness and policy making

    Language:Python3200

  • NightMachinery/stochastic

    My Julia megarepo; an infectious disease model, a Poisson picture redrawing filter, a colorful animator of a 2D ising model, and more.

    Language:HTML3300

  • P2-718na/SIR-model-simulation

    SIR model implementation for pandemic spread

    Language:C++3100

  • binDebug3/EVAdoption

    (2024) Modeling electric vehicle adoption with differential equations by Dallin Stewart, Jeff Hansen, Gwen Martin, Eliza Powell

    Language:Jupyter Notebook2

  • doscsy12/network_sci_analysis

    Network data analysis using networkx, and gephi for visualisations.

    Language:Jupyter Notebook2111

  • lorenzomancini1/SIS_and_SIR_model_percolation

    Implementation of the one dimensional Contact Process (SIS model) and two dimensional SIR model in order to find critical exponents of Percolation.

    Language:Jupyter Notebook2100

  • meliksahturker/NetGen

    Network Generator framework that simulates daily interactions in an urban town

    Language:Python2101

  • rkolovanov/computing-mathematics

    Моделирование различных динамических процессов с использованием методов вычислительной математики

    Language:Jupyter Notebook2100