species
There are 152 repositories under species topic.
UniMath/agda-unimath
The agda-unimath library
cybercongress/cybercongress
Helping humanity evolve
ropensci/rgbif
Interface to the Global Biodiversity Information Facility API
ropensci/spocc
Species occurrence data toolkit for R
drostlab/orthologr
Genome wide orthology inference and dNdS estimation
SpeciesFileGroup/taxonworks
Workbench for biodiversity informatics.
oganm/homologene
:mouse: :left_right_arrow: :couple: An r package that works as a wrapper to homologene
ropensci/traits
R package for accessing species trait data from multiple databases
drostlab/metablastr
Seamless Integration of BLAST Sequence Searches in R
fishial/fish-identification
Fish Detection (Segmentation) & Classification models and training scripts
uclchem/UCLCHEM
UCLCHEM - A gas-grain chemical code for Astrochemistry.
seiyria/fantastical
A fantasy name generator based on fantasygen
oganm/geneSynonym
Quick access to gene synonyms
MoBiodiv/mobr
Tools for analyzing changes in diversity across scales
tseemann/sixess
🔬🐛 Rapid 16s rRNA identification from isolate FASTQ files
MoBiodiv/mobsim
Spatial analysis and simulation of ecological communities
sylvainschmitt/sdmverse
sdmverse is a collaborative metapackage for listing all the metadata of the Species Distribution Modelling (SDM) packages. sdmverse includes a graphical interface available locally or online (see below). sdmverse integrates metadata from SDM packages and checks their validity against the CRAN metadata for perenity.
usa-npn/rnpn
R client for the National Phenology Network database API
miguel-porto/flora-on-server
Work collaboratively in IUCN Red List assessments and manage online biodiversity databases, including a graph-based taxonomy system, species traits and habitats, and species occurrences.
bcgov/biohubbc
Species Inventory Management System (SIMS)
HemingNM/ENMwizard
Advanced Techniques for Ecological Niche Modeling Made Easy
specify/specify6
Source Code for Specify 6, Biological Collections Management Platform
stefanpeidli/mousipy
Translates an AnnData object with mouse gene symbols into one with human gene symbols by mapping orthologs from biomart.
suberek/arboles
Mapa de Arbolado Urbano
ropensci-archive/originr
:no_entry: ARCHIVED :no_entry: Fetch Species Origin Data from the Web
amirtaqi/sCLSVOF_mass_transfer
Simple coupled level set with volume of fraction (sCLSVOF) solver integrated with transport of species
AtlasOfLivingAustralia/ala-name-matching
Atlas name matching API and index generation
RitRa/Project2018-iris
Fisher’s Iris data set analysis
blossom-evolution/blossom
A Python package for simulating the evolution of organisms.
EricMarcon/entropart
Entropy Partitioning to Measure Diversity
mpio-be/rangeMapper
A platform for the study of macroecology of life history traits
sarisabban/SinfNet
A collection of datasets and neural networks for microorganism image classification
DSCKGEC/Hello-ML
Intro to machine learning using Iris dataset.
globalbioticinteractions/template-dataset
Template species interaction data repository compatible with globalbioticinteractions.org
r3w0p/BirdCNN
A predictive model to identify four species of bird from their vocalisations. It is my contribution to a Hackster competition.
SpeciesFileGroup/taxonpages
TaxonPages is a tool to serve TaxonPages.