structure-alignment

There are 8 repositories under structure-alignment topic.

  • biojava/biojava

    :book::microscope::coffee: BioJava is an open-source project dedicated to providing a Java library for processing biological data.

    Language:Java58779451385

  • BGI-SynBio/PyMOL-PUB

    Rapid generation of high-quality structure figures for publication with PyMOL-PUB

    Language:Python60122

  • shiming-chen/HSVA

    Official PyTorch Implementation of HSVA (NeurIPS'21)

    Language:Python25128

  • BEAM-Labs/RTM-align

    Official code of RTM-align: an improved RNA alignment tool with enhanced short sequence performance via post-standardization and fragment alignment.

    Language:C++5000

  • RBVI/minrms

    A bioinformatics algorithm for generating sequence alignments from 3D structures

    Language:C++3111
  • SNPio

    btmartin721/SNPio

    API to read, write, and filter DNA sequence alignment files

    Language:Python2271

  • cspinetta/bio-tp

    TP Bioinformatica - UTN FRBA

    Language:Scala1400

  • nifets/TorusEvol

    This is a Bayesian model for sequence and structure alignment of multiple proteins in a star phylogeny. The structural divergence across time is modelled by letting the dihedral angles of the backbones evolve according to a diffusion over the flat square torus.

    Language:Julia0200