tree-inference

There are 3 repositories under tree-inference topic.

  • scFates

    LouisFaure/scFates

    a scalable python suite for tree inference and advanced pseudotime analysis from scRNAseq data.

    Language:Python492311

  • raphael-group/LAML

    LAML is a maximum likelihood algorithm to infer cell phylogeny from dynamic lineage tracing data

    Language:Python590

  • ggruber193/automated-window-sliding

    Bioinformatics pipeline using a sliding window approach to create a sequence of trees from multiple sequence alignments.

    Language:Nextflow0100