LouisFaure/scFates

Issues

• error while using scf.tl.linearity_deviation

  #23 opened a year ago by rLannes
  4

• 3 milesones make error in scf.tl.linearity_deviation.

  #37 opened 2 months ago by ChaewonKim99
  1

• Fitting & clustering significant features color_exp

  #34 opened 2 months ago by pmarzano97
  1

• Compatibility Issue with pandas in scFates 1.0.8 while i use tl.test_fork

  #35 opened 2 months ago by Almasimaryam
  5

• tl.branch_specific issues

  #36 opened 2 months ago by AJTDaedalus
  2

• imcompatible with cellrank version2

  #33 opened 6 months ago by wangmhan
  1

• GPU mode dependencies troubleshooting

  #20 opened a year ago by willey2020
  4

• get a weird figure following the notebook named Bone marrow fates

  #32 opened 7 months ago by huili469r
  1

• Error when `scf.tl.dendrogram()`

  #30 opened 9 months ago by Fantasque68
  6

• Maximum complexity of trees [question]

  #29 opened 10 months ago by vitkl
  2

• Testing fit: KeyError: 'de_p'

  #11 opened 10 months ago by wbrett87
  5

• Error in sci.pl.single_trend

  #10 opened 10 months ago by PaulJonasJost
  1

• scf.tl.pseudotime:ValueError: probabilities do not sum to 1

  #9 opened 10 months ago by annrosebright
  1

• error in `pseudotime()`

  #8 opened 10 months ago by zoepiran
  3

• Error in scf.tl.branch_specific

  #13 opened 10 months ago by min0609
  1

• crashes due to rpy2 not finding the R install on conda

  #18 opened 10 months ago by yedeer12
  1

• `root` and `leaves` with `test_association()`

  #24 opened 10 months ago by james-cranley
  2

• Cannot install with python 3.8, need python >=3.9

  #28 opened 10 months ago by quantumdot
  1

• KeyError: 'explode' exception while plotting clusters

  #27 opened 10 months ago by quantumdot
  3

• Questions about scf.pl.single_trend'

  #25 opened a year ago by SummerColdWind
  4

• RecursionError: maximum recursion depth exceeded in scf.tl.slide_cells

  #22 opened a year ago by willey2020
  2

• issue with scf.tl.cluster and scf.pl.trends functions in notebook

  #19 opened a year ago by 16nikita
  2

• scf.pl.trends error on jupyter notebook

  #21 opened a year ago by hw1804
  10

• DLL load failed while importing _loess: The specified module could not be found.

  #12 opened a year ago by rajpiyush18
  1

• When running scf.tl.curve, module 'networkx' has no attribute 'to_scipy_sparse_matrix'

  #17 opened a year ago by yedeer12
  2

• dendrogram Tree line and cells are not alligned in the plot

  #16 opened 2 years ago by willey2020
  3

• Errors with scf.pl.trends

  #4 opened 3 years ago by Qotov
  3

• error: keyword grid_b is not recognized with scf.pl.slide_cors

  #15 opened 2 years ago by pchiang5
  2

• scf.tl.pseudotime error

  #14 opened 2 years ago by pchiang5
  2

• error in test_association

  #7 opened 2 years ago by jksr
  6

• Importing scFates

  #6 opened 2 years ago by sidrahmaryam-cyber
  4

• error in tl.test_association, "pip3 install rpy2" not working

  #5 opened 3 years ago by Roger-GOAT
  4

• Unable to import scFates

  #3 opened 4 years ago by Marius1311
  2

• citing CellRank

  #2 opened 4 years ago by Marius1311
  2