tpesout

Pinned Repositories

assembly_workflow
Poor-man's workflow for Shasta, MarginPolish, and HELEN
Language:Shell00
bac_analysis
Language:C00
cmps242-hw5
Language:Jupyter Notebook00
genomics_scripts
A repository for scripts to do analysis of genomic data
Language:Python7 1 01
marginPhase
Language:C00
megalodon_wdl
Language:wdl00
methylvaluate
An evaluation script for methylation BEDs
Language:Python1 3 00
mypipeline
for nfcore training
Language:Nextflow00
phase_appraise
Toolkit for evaluating and visualizing haplotagging correctness
Language:Python00
shasta
De novo assembly from Oxford Nanopore reads.
Language:C++0 1 00

tpesout's Repositories

tpesout/genomics_scripts
A repository for scripts to do analysis of genomic data
Language:Python7 1 01
tpesout/methylvaluate
An evaluation script for methylation BEDs
Language:Python1 3 00
tpesout/assembly_workflow
Poor-man's workflow for Shasta, MarginPolish, and HELEN
Language:Shell00
tpesout/bac_analysis
Language:C00
tpesout/cmps242-hw5
Language:Jupyter Notebook00
tpesout/marginPhase
Language:C00
tpesout/megalodon_wdl
Language:wdl00
tpesout/mypipeline
for nfcore training
Language:Nextflow00
tpesout/phase_appraise
Toolkit for evaluating and visualizing haplotagging correctness
Language:Python00
tpesout/shasta
De novo assembly from Oxford Nanopore reads.
Language:C++0 1 00
tpesout/signalAlign
HMM-HDP models for MinION signal alignments
Language:C0 1 00
tpesout/ta_examples
Used as an example for demonstrating GIT and GITHUB
1 1
tpesout/vgp-assembly
VGP repository for the genome assembly working group
Language:Shell1 0