simpler rule for CV vs DB?
bradfordcondon opened this issue · 1 comments
bradfordcondon commented
Use the EBI breadcrumb.
so teal box = CV, orange box = DB. IF
obo namespace
is provided in the sidebar, that will override the CV
This works for all DB/CVs except where capitalization is inconsistent between db and cv.
bradfordcondon commented
Worded differently from Stephen
- Find the appropriate term in the EBI Lookup ervice
- Provide the name of the vocabulary that houses the term. It is found on the term page of EBI Lookup service in the breadcrumb (e.g. OS > Bioinformatics operations, data types, formats, identifers and topics EDAM > data:2976). EDAM is surrounded by a teal box and is the name of the vocaulary... and in your code that is used for the cv.name. (edited)
- Provide the accession vocabulary prefix by using the portion of the term just before the colon (e.g. data:2976). "data" becomes the db.name in your code.