trneedham

Decorated-Merge-Trees

Tools for generating and comparing Decorated Merge Trees, enriched persistence-based topological data descriptors.

gromov-wasserstein-statistics

Statistics on the space of asymmetric networks via Gromov-Wasserstein distance

IntroductionToTopologicalDataAnalysis

MathForDataScience-Fa22

Planar-Elastic-Metrics

Code for matching curves with Elastic Metrics

Python-Bootcamp-2019

Materials for the Erdos Institute's Code Programming Bootcamp, May 2019.

QuantizedGromovWasserstein

Scalable framework for comparing metric measure spaces with up to 1M points.

Spectral-Gromov-Wasserstein

Graph matching and clustering by comparing heat kernels via optimal transport.

TDASpring21

Software demonstrations for a course on Topological Data Analysis.

Weighted-Euler-Curve-Transform

Code to produce Weighted Euler Curve Transforms from segmented greyscale image data

trneedham/Spectral-Gromov-Wasserstein

Graph matching and clustering by comparing heat kernels via optimal transport.

trneedham/Decorated-Merge-Trees

Tools for generating and comparing Decorated Merge Trees, enriched persistence-based topological data descriptors.

trneedham/QuantizedGromovWasserstein

Scalable framework for comparing metric measure spaces with up to 1M points.

trneedham/gromov-wasserstein-statistics

Statistics on the space of asymmetric networks via Gromov-Wasserstein distance

trneedham/TDASpring21

Software demonstrations for a course on Topological Data Analysis.

trneedham/IntroductionToTopologicalDataAnalysis

trneedham/Python-Bootcamp-2019

Materials for the Erdos Institute's Code Programming Bootcamp, May 2019.

trneedham/Weighted-Euler-Curve-Transform

Code to produce Weighted Euler Curve Transforms from segmented greyscale image data

trneedham/MathForDataScience-Fa22

trneedham/Planar-Elastic-Metrics

Code for matching curves with Elastic Metrics

trneedham/TDACourse

trneedham/Topologically-Attributed-Graphs

trneedham/DistrictingAndTDA

trneedham/Framed-Curve-Matching

Matlab routines to compute geodesics between open and closed framed space curves. Based on the paper https://arxiv.org/abs/1807.03477

trneedham/MathForDataScience-Fall21

trneedham/MathForDataScience-Fall24

Course Materials for Math for Data Science Course at FSU

trneedham/MathForDataScience-Sp22

trneedham/Code2020Materials

trneedham/COOT

CO-Optimal Transport

trneedham/diode

alpha shape generator using CGAL

trneedham/FSU_Machine_Learning_Seminar

Jupyter notebooks on clustering and classification for the FSU ML Seminar.

trneedham/giotto-learn

A high performance topological machine learning toolbox in Python

trneedham/gtda-challenge-2020

This is the repo for the Giotto-tda use-cases challenge 2020.

trneedham/MathForDataScience-Fall23

Math for Data Science, FSU, Fall 2023

trneedham/minicircles

Simple program to clean and display DNA minicircle data

trneedham/proteins

Plot protein backbones from pdb file