Pinned Repositories
bioinformatics-coffee-hour
Short lessons from FAS Informatics coffee hour
degenotate
learning-bioinformatics-at-home
resources for learning bioinformatics
snpArcher
Snakemake workflow for highly parallel variant calling designed for ease-of-use in non-model organisms.
brood-parasite-genomics
linked-selection
musca-immunity
ratite-genomics
Scripts and other material for the assembly and analysis of ratite genomes.
snpArcher
Snakemake workflow for highly parallel variant calling designed for ease-of-use in non-model organisms.
taelgar-utils
A collection of Python scripts to work with Taelgar Obsidian notes
tsackton's Repositories
tsackton/linked-selection
tsackton/ratite-genomics
Scripts and other material for the assembly and analysis of ratite genomes.
tsackton/snpArcher
Snakemake workflow for highly parallel variant calling designed for ease-of-use in non-model organisms.
tsackton/brood-parasite-genomics
tsackton/musca-immunity
tsackton/taelgar-utils
A collection of Python scripts to work with Taelgar Obsidian notes
tsackton/compPopGen_ms
Final version of MK pipeline from larger analyses in collaboration with Allison Shultz (ajshultz) & Tim Sackton (tsackton)
tsackton/HGDP_PopStruct_Exercise
A classroom exercise using HGDP SNP data to introduce population structure concepts
tsackton/ls2
tsackton/micro-course
Code for Informatics nano course
tsackton/PhyloAcc
PhyloAcc a software to detect the changes of conservation of a genomic region
tsackton/popstruct_workshop
tsackton/pyDNase
Python module for the easy handling and analysis of DNase-seq data
tsackton/r-novice
data carpentry materials for introduction to R
tsackton/RERconverge
Analysis of convergence between organismal traits and DNA/protein sequences
tsackton/rotifer-outcrossing
tsackton/snpArcher_qc_demo
tsackton/stdpopsim
A library of standard population genetic models
tsackton/taelgar
tsackton/taelgarmap
tsackton/taelgarverse
Taelgar Website
tsackton/taelgarverse-site-generator
Repo to test mkdocs version of taelgarverse
tsackton/tsackton.github.io
tsackton/YRV-damID