tvkent
Evolutionary Genomics | UNC Chapel Hill Remote @ UBC Biodiversity Centre
Wright LabVancouver, BC
Pinned Repositories
aedes_demography
Scripts for Demographic history and the efficacy of selection in the globally invasive mosquito Aedes aegypti
angsd-wrapper
Utilities for analyzing next generation sequencing data
Bioinformatics_club
notes from workshop
CV
Degeneracy
4folds and 0folds
GERPplusplus
GERP++ code from Sidow Lab modified by Kevin Thornton to compile properly.
Pi-Between
Using ANGSD and Python/R to calculate and plot pi-between in windows along the genome
tvkent.github.io
tvkent's Repositories
tvkent/GERPplusplus
GERP++ code from Sidow Lab modified by Kevin Thornton to compile properly.
tvkent/Pi-Between
Using ANGSD and Python/R to calculate and plot pi-between in windows along the genome
tvkent/CV
tvkent/Degeneracy
4folds and 0folds
tvkent/tvkent.github.io
tvkent/aedes_demography
Scripts for Demographic history and the efficacy of selection in the globally invasive mosquito Aedes aegypti
tvkent/angsd-wrapper
Utilities for analyzing next generation sequencing data
tvkent/Bioinformatics_club
notes from workshop
tvkent/BioinformaticsUtils
general scripts for bioinformatics
tvkent/BIS180L_web
Course Website for UC Davis BIS180L
tvkent/CrossoverMeme
tvkent/eve102
tvkent/Fijiensis
fijiensis recombination hotspot work
tvkent/GenomeSize
Failed attempt to predict genome size with GBS sequencing data
tvkent/gh-usernames
repository to illustrate forking and to collect github usernames
tvkent/Grandiflora_recombination
recombination mapping project in Capsella grandiflora
tvkent/hapcut
tvkent/Inbreeding
Notes on calculating inbreeding using ngsF
tvkent/jkreinz.github.io
tvkent/Kent2016glumaepatula
random rice project things
tvkent/Millennial
A minimalist Jekyll theme for running an online publication
tvkent/minsum
scripts and description of methods from Sas et al.
tvkent/msr
Process MS results in R, in a tidy way
tvkent/phasedibd
Identity-by-descent inference using the templated positional Burrows-Wheeler transform (TPBWT)
tvkent/scripts
mostly python scripts
tvkent/shiny_popgen
Shiny apps for teaching Population Genetics
tvkent/SpaceMix
tvkent/Thetas_and_Tajimas_D
Notes on calculating thetas and tajD using ANGSD/angsd-wrapper