/crc-analysis

Multi-cohort analysis of colorectal cancer metagenome identified altered bacteria across populations and universal bacterial markers

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crc-analysis

Multi-cohort analysis of colorectal cancer metagenome identified altered bacteria across populations and universal bacterial markers

References

Arnold, M., Sierra, M. S., Laversanne, M., Soerjomataram, I., Jemal, A. & Bray F. (2017). Global patterns and trends in colorectal cancer incidence and mortality. Gut, 66: 683-691.

Dai, Z., et. al. (2018). Multi-cohort analysis of colorectal cancer metagenome identified altered bacteria across populations and universal bacterial markers. Microbiome, 6:70.

*Kraken is an ultrafast and highly accurate program for assigning taxonomic labels to metagenomic DNA sequences.