ucl-pond/pySuStaIn

Issues

• Parallelize cross validation

  #64 opened 24 days ago by Fedeanceri
  4

• Error while running the algorithm

  #63 opened a month ago by TamirEisenstein
  1

• Request for Data Output for Brain Surface Rendering

  #62 opened 3 months ago by KGZaker
  2

• In the dataset, are the individuals from the control group (those who are healthy or have a Diagnosis value of 0) eventually going to be classified into subtypes as well?

  #61 opened 3 months ago by hyywakeup
  2

• About how to set the z_vals and z_max

  #60 opened 3 months ago by xullllllll
  1

• IndexError during CV

  #59 opened 5 months ago by katrinaCode
  1

• selecting the best number of subtypes

  #58 opened 3 months ago by xullllllll
  0

• Mixed Data Types

  #55 opened 5 months ago by abadgerw
  3

• selecting the best number of subtypes

  #57 opened 5 months ago by xullllllll
  0

• selecting the best number of subtypes

  #56 opened 5 months ago by xullllllll
  0

• Two questions in ZscoreSustain

  #54 opened 6 months ago by xullllllll
  4

• Two questions in ZscoreSustain

  #53 opened 6 months ago by xullllllll
  0

• subtype_and_stage_individuals_newData performance issue

  #52 opened 6 months ago by 88vikram
  0

• Enabling PVD Plot Legends

  #49 opened 9 months ago by katrinaCode
  1

• About some installation error

  #51 opened 6 months ago by Teemoninja
  1

• Apply the trained model to external/independent data

  #50 opened 7 months ago by anbai106
  2

• Idea: SusStaIn constraint with longitudinal measures

  #31 opened 3 years ago by gdevenyi
  6

• ValueError in AbstractSuStaIn

  #48 opened 2 years ago by katrinaCode
  10

• Fix for "rare" divide by zero problem

  #28 opened 3 years ago by illdopejake
  6

• Ordinal Sustain Notebook

  #39 opened 2 years ago by mmontazeri2001
  3

• Missing data

  #1 opened 5 years ago by noxtoby
  5

• Mislabelled subtype numbers in PVDs

  #40 opened 2 years ago by Bea-Taylor
  9

• Parallelization fails -- TypeError: cannot pickle '_abc._abc_data' object

  #41 opened 2 years ago by katrinaCode
  4

• Example code for mixture_KDE

  #47 opened 2 years ago by alexander-ratzan
  3

• [Question] Can we discover subtypes in a training test, and use the discovered subtypes to subtype subjects of a test set?

  #44 opened 2 years ago by little-nem
  1

• minor installation issue with sklearn

  #43 opened 2 years ago by illdopejake
  1

• Allow for complete model reloading

  #42 opened 2 years ago by sea-shunned
  2

• Parallel CV doesn't work (aka "Why do all my CV jobs run for fold 0 only???")

  #37 opened 2 years ago by noxtoby
  1

• Question on Using pySuStaIn on ADNI

  #36 opened 3 years ago by lmz123321
  3

• Data Preparation Pipeline/Code

  #34 opened 3 years ago by lmz123321
  5

• How to interpret the Positional Variance Diagram

  #35 opened 3 years ago by lmz123321
  1

• Adding a colourbar to PVD plots

  #32 opened 3 years ago by sea-shunned
  6

• IndexError while running the SuStaIn Workshop file

  #33 opened 3 years ago by chinei
  2

• SuStaIn in pymc3, and Variational Inference?

  #13 opened 3 years ago by Sinha-Ujjawal
  1

• `use_parallel_startpoints` fails on numpy 1.21

  #27 opened 3 years ago by noxtoby
  6

• multiple sclerosis

  #20 opened 4 years ago by luantunez
  3

• Problem when defining high number of biomarkers

  #12 opened 4 years ago by simonepenna
  0

• Out of bounds issue in: self._optimise_parameters()

  #16 opened 4 years ago by rperea14
  3

• TypeError: 'int' object is not iterable in ZscoreSustain

  #17 opened 4 years ago by 88vikram
  8

• Fixing controls in GMM

  #21 opened 4 years ago by 88vikram
  2

• Cross validation -- option to control # of threads

  #15 opened 4 years ago by illdopejake
  5

• bug in cross-validation when using "select_fold"

  #11 opened 4 years ago by illdopejake
  2

• Cross-validation for selecting optimal number of clusters

  #2 opened 5 years ago by noxtoby
  1