ucsd-ccbb/qiimp

Issues

• Allow advanced user option to have unlocked spreadsheet

  #187 opened 4 years ago by adswafford
  0

• Templates require updating to bring in alignment with Qiita conventions as of 2021

  #186 opened 4 years ago by adswafford
  0

• License for use and extension?

  #185 opened 4 years ago by dwinston
  0

• Wizard adds host_bmi when selecting human host, but allows the addition of a bmi column

  #184 opened 5 years ago by shaeHansen
  0

• Instruments for prep file support (if this is added)

  #183 opened 6 years ago by adswafford
  0

• After copying and pasting into Qiimp template cells become protected from editing when they should not be.

  #159 opened 6 years ago by adswafford
  2

• Placeholder: consider supporting prep info files in Qiimp?

  #182 opened 6 years ago by adswafford
  0

• Add template for controls

  #174 opened 6 years ago by adswafford
  5

• Add "DO NOT DELETE" message to the hidden tabs in the templates

  #163 opened 6 years ago by adswafford
  2

• root path requires trailing slash ('/')

  #178 opened 6 years ago by charles-cowart
  1

• Remove need to put trailing slash at end of subfolder in url in order for tornado handler to recognize it

  #181 opened 6 years ago by AmandaBirmingham
  1

• Expand install documentation to include description of url_subfolder setting in config

  #180 opened 6 years ago by AmandaBirmingham
  0

• timestamp validation code is occasionally in error, if column format is changed from 'text'.

  #179 opened 6 years ago by charles-cowart
  1

• Issue in metadata sheet (see "host_body_site"): explanation for column showed up in a cell and the cell can no longer be changed

  #177 opened 6 years ago by stephanieorch
  0

• Mouse stool 'env_feature' should be mammalia-associated habitat

  #173 opened 6 years ago by adswafford
  6

• Can't use "Edit"->"Replace->"Replace All" on Qiimp Sheets

  #176 opened 6 years ago by stephanieorch
  0

• Add to Qiimp tutorial how to convert column headers to qiimp compliant

  #156 opened 6 years ago by adswafford
  5

• Add 'experiment_design_description' (free text) field to ebi_submittable template

  #171 opened 6 years ago by adswafford
  1

• How should users handle blanks in metadata?

  #175 opened 6 years ago by AmandaBirmingham
  0

• Uploading Qiimp-derived metadata no longer works (metadata_form A1 is empty)

  #172 opened 6 years ago by adswafford
  3

• Improve max/min validation to give more meaningful message if type failure

  #169 opened 6 years ago by AmandaBirmingham
  1

• Require continuous default to fall between min and max if those are specified

  #162 opened 6 years ago by AmandaBirmingham
  1

• Fail validation for integer, datetime max and mins with no allowable values between them

  #166 opened 6 years ago by AmandaBirmingham
  0

• If a user cancels changing their package mode selection, the new radio button is still selected

  #164 opened 6 years ago by AmandaBirmingham
  0

• Allow time only (no date) to be supplied for continuous variables

  #151 opened 6 years ago by adswafford
  0

• Make default units 'years' for host_age and 'cm' for host_height

  #148 opened 6 years ago by adswafford
  9

• Add ability for QIIMP to "break out" of Qiita iframe

  #165 opened 6 years ago by AmandaBirmingham
  3

• Date comparison formula incorrectly passes invalid dates for some exclusive comparisons

  #168 opened 6 years ago by AmandaBirmingham
  0

• Link to main page from error page doesn't capture subfolder

  #167 opened 6 years ago by AmandaBirmingham
  0

• Remove all default null values in package fields

  #157 opened 6 years ago by adswafford
  2

• Possible to unhide hidden tabs without inputting password

  #140 opened 7 years ago by AmandaBirmingham
  4

• Restrict boolean so True and False values aren't the same

  #139 opened 6 years ago by adswafford
  0

• Hide formulas throughout QIIMP workbooks

  #160 opened 6 years ago by AmandaBirmingham
  0

• Make hyperlink from validation page go to sample NAME column, not sample id column

  #161 opened 6 years ago by AmandaBirmingham
  0

• Make accordion sections expand when clicking + instead of just name

  #134 opened 6 years ago by AmandaBirmingham
  0

• Add more e.g. examples to max and min to show examples for integers and datetime

  #137 opened 6 years ago by adswafford
  0

• Make validation msg more informative when user tries to enter field already defined in package

  #141 opened 6 years ago by AmandaBirmingham
  1

• host_weight_units has space before ' missing:' and shouldn't have 'missing:' at all

  #150 opened 6 years ago by adswafford
  3

• Update custom field instructions to state custom field cannot start with an underscore

  #144 opened 6 years ago by shaekin
  0

• 'host_taxid_units' and 'taxon_id_units' should not exist

  #149 opened 6 years ago by adswafford
  0

• human-stool, mouse-stool, and rat-stool package has body_site and host_body_site (same with habitat and package)

  #154 opened 6 years ago by stephanieorch
  1

• Built environment package issue: sample_type should not restrict to only not applicable and anaerobic digester content

  #158 opened 6 years ago by adswafford
  3

• host_body_mass_index_units is not necessary

  #153 opened 6 years ago by shaekin
  3

• Items not autofilled when human, stool is selected

  #152 opened 6 years ago by shaekin
  2

• Have sample type default to "other" if that is the only available option.

  #145 opened 6 years ago by shaekin
  4

• Can submit after picking a package but not actually clicking button to select it, which causes error

  #131 opened 7 years ago by AmandaBirmingham
  1

• change EBI null terms to remove "missing: " prefix

  #135 opened 7 years ago by adswafford
  1

• Provide feedback that you hit submit and need to wait for template

  #138 opened 7 years ago by AmandaBirmingham
  1

• Remove 1000 sample warning note at bottom of spreadsheet

  #143 opened 7 years ago by adswafford
  1

• update data dictionaries to reflect EBI null terms

  #136 opened 7 years ago by adswafford
  1