upendrak
I am Head of Data Science at Greenlight Biosciences working to answer compelling questions to enable discovery and novel insights from Biological data
Greenlight BiosciencesDurham, North Carolina
Pinned Repositories
2019-02-23-WorkshopResources
advance_R
Cyberduck_quickstart
DESeq2
flask-hello-world
Flask Hello World Example for Render
Genomics_LLMs
A collection of genomics LLMs
lincRNA_pipeline
Optimizing the pipeline for lincRNA starting from TopHat output to final lincRNA detection
plantmd
Image-based plant disease prediction using CNNs
pysparkdemo
streamlit-aws-tutorial
upendrak's Repositories
upendrak/advance_R
upendrak/Cyberduck_quickstart
upendrak/DESeq2
upendrak/2016-06-30-greenland
upendrak/BUSCO-2.0
BUSCO: assessing genome assembly and annotation completeness with single-copy orthologs (v2.0)
upendrak/bwa_mem_nms_modified_bwa_0.7.15
upendrak/CheckM
upendrak/cufflinks-2.2.1
upendrak/cyverse_base_tutorial_repo
upendrak/deseq2_multi
upendrak/docker-builds
A place to put docker build files
upendrak/docker-webinar-1
upendrak/dockerfile-quast
QUality ASsesment Tool for Genome Assemblies
upendrak/edgeR_multi
upendrak/intro_r
SWC 2016-11-05 Tucson
upendrak/iPlant-basic-scripts
My place for various, simple wrapper scripts
upendrak/IUTA-1.0
upendrak/jetstream-pegasus
Example setup for HTCondor/Pegasus VMs on Jetstream
upendrak/metaquast-4.0
upendrak/mulled
Mulled - Automatized Containerized Software Repository
upendrak/python-novice-gapminder
Introduction to Python for non-programmers using gapminder data
upendrak/quast-4.0
upendrak/rnaQUAST-1.2.0
upendrak/SAMtools_BCFtools_0.1.19
upendrak/samtools_sam_to_sorted_bam-1.19_mod
upendrak/STAR2.5.2a
upendrak/swc-prep
testing RStudio integration
upendrak/tbl2asn
upendrak/tophat-2.1.0
upendrak/tophat-2.1.1