uribe-convers
Senior Bioinformatics Manager @Invitae: bioinformatics, genomics, and phylogenomics in Python 🐍 - NGS whisperer
@InvitaeBoise, ID
Pinned Repositories
Fungi_ToL
Using PyPHLAWD to build a comprehensive fungal phylogeny with GenBank data
Genomic_Scripts
Various scripts to wrangle genomic data
git-workshop-2021
More-TextWrangler-and-BBEdit-Color-Schemes
This is Andrew Hazelden's Collection of TextWrangler and BBEdit Color Schemes
Online_Courses
A few online programing courses I've taken
pyjanitor
Clean APIs for data cleaning. Python implementation of R package Janitor
secret_santa
code to play secret santa
Sequence_Capture_Data_Spring_2017
Analyses done on sequence capture data from a Illumina HiSeq3000 and NextSeq, PE100 and PE150 respectively. The data were analyzed using the HybPiper pipeline
Vitis_Phylogenomics
Phylogenomic analyses on the genus Vitis using SNP data. We are comparing the relationships between the wild and cultivated varieties
Woodiness
Studying the evolution of woodiness of seed plants
uribe-convers's Repositories
uribe-convers/Sequence_Capture_Data_Spring_2017
Analyses done on sequence capture data from a Illumina HiSeq3000 and NextSeq, PE100 and PE150 respectively. The data were analyzed using the HybPiper pipeline
uribe-convers/Fungi_ToL
Using PyPHLAWD to build a comprehensive fungal phylogeny with GenBank data
uribe-convers/Genomic_Scripts
Various scripts to wrangle genomic data
uribe-convers/git-workshop-2021
uribe-convers/More-TextWrangler-and-BBEdit-Color-Schemes
This is Andrew Hazelden's Collection of TextWrangler and BBEdit Color Schemes
uribe-convers/Online_Courses
A few online programing courses I've taken
uribe-convers/pyjanitor
Clean APIs for data cleaning. Python implementation of R package Janitor
uribe-convers/secret_santa
code to play secret santa
uribe-convers/Vitis_Phylogenomics
Phylogenomic analyses on the genus Vitis using SNP data. We are comparing the relationships between the wild and cultivated varieties
uribe-convers/Woodiness
Studying the evolution of woodiness of seed plants
uribe-convers/sondovac
Sondovač is a script to create orthologous low-copy nuclear probes from transcriptome and genome skim data for target enrichment. For latest version check "releases".
uribe-convers/teaching
scripts related to teaching biology and bioinformatics
uribe-convers/uribe-convers.github.io
Personal webpage