Pinned Repositories
EMPHASIS-Layer
Gene-Expression-Plotter-EOSC-Life-Demonstrator
A Javascript based tool to visualize gene expression over a custom discrete variable (e.g. time) and grouped by another (e.g. tissue or genotype). This project integrates data from 'fairdomhub'.
GeneExpressionPlots
A Javascript based tool to visualize gene expression over a custom discrete variable (e.g. time) and grouped by another (e.g. tissue or genotype).
gfftk
GFF toolkit to work with GFF files
MapMan-Mercator-4
To reprorduce figures etc
MapMan2GO
Maps MapMan-Bins to compound Gene Ontology Term Annotations (GOA).
prot-scriber
Assigns short human readable descriptions to biological sequences or gene families using references. For this, prot-scriber consumes sequence similarity search results in tabular format (Blast or Diamond).
Trimmomatic
untwistApp
A tool for visualization of phenotypic data, GWAS analysis and some Bioinformatics tools
usadellab.github.io
usadellab's Repositories
usadellab/Trimmomatic
usadellab/prot-scriber
Assigns short human readable descriptions to biological sequences or gene families using references. For this, prot-scriber consumes sequence similarity search results in tabular format (Blast or Diamond).
usadellab/GeneExpressionPlots
A Javascript based tool to visualize gene expression over a custom discrete variable (e.g. time) and grouped by another (e.g. tissue or genotype).
usadellab/MapMan2GO
Maps MapMan-Bins to compound Gene Ontology Term Annotations (GOA).
usadellab/usadellab.github.io
usadellab/gfftk
GFF toolkit to work with GFF files
usadellab/Gene-Expression-Plotter-EOSC-Life-Demonstrator
A Javascript based tool to visualize gene expression over a custom discrete variable (e.g. time) and grouped by another (e.g. tissue or genotype). This project integrates data from 'fairdomhub'.
usadellab/untwistApp
A tool for visualization of phenotypic data, GWAS analysis and some Bioinformatics tools
usadellab/course
usadellab/EMPHASIS-Layer
usadellab/Joseph_Atemias_labbook
This repository is used to provide a Wiki that Joseph Atemia can use as a lab-book in which every step taken in scientific work is documented. Also documents that might be important can be shared here.
usadellab/MapMan-Mercator-4
To reprorduce figures etc
usadellab/PhysioSpaceMethods
usadellab/Robina
This is Robina Arcas featuring Isoform and in the future single cell analysis. Uses Kallisto
usadellab/Teaching
Just getting started with assembly and RNA
usadellab/mars
Project code for BioHackathon Europe 2023.
usadellab/MARS-ARC2Repo
MARS-ARC2Repo is an implementation of Multi-omics Adapter for Repository Submissions (MARS) in IBG-4
usadellab/physiospace_shiny
A Rmarkdown shiny front-end to github.com/JRC-COMBINE/PhysioSpaceMethods
usadellab/sfb1535_MibiNet_DB