/BART-WEB

Combining MARGE(http://cistrome.org/MARGE/index.html) and BART(http://faculty.virginia.edu/zanglab/bart/) to predict TF binding.

Primary LanguagePython

flask-tf-binding

Introduction

Through this project, you can combine MARGE and BART together to do transcription factors binding prediction.

How to use it

When the project is finished, please visit [MARGE-BART/zanglab].

Or if you want to run in your localhost, download those related projects, MARGE/BART/USCS_TOOLS. Install them, and change the conf.yaml file...

$ sh run.sh

However, those steps are complicated. So please wait for me to publish in a public IP. It worths waiting! :)

License

Chongzhi Zang Lab at the University of Virginia.