Pinned Repositories
cupyck
cuda-accelerated multistranded partition function
data-nbt17
Data for paper "Random Access in Large-Scale DNA Data Storage"
dna-nanopore-computing
Analysis pipeline for running DNA circuits on the nanopore
NanoporeTERs
Code repository for 2019 NanoporeTERs paper.
PASTOR-sequencing
Porcupine
Porcupine is a molecular tagging system to tag physical objects with DNA.
poretitioner
primo-similarity-search
Code and models for the primo similarity search project
puddle
A system for high-level, reliable programming of microfluidic devices
purpledrop
Newest iteration of PurpleDrop. Reimplemented in kicad5
Molecular Information Systems Lab's Repositories
uwmisl/purpledrop
Newest iteration of PurpleDrop. Reimplemented in kicad5
uwmisl/dna-nanopore-computing
Analysis pipeline for running DNA circuits on the nanopore
uwmisl/PASTOR-sequencing
uwmisl/primo-similarity-search
Code and models for the primo similarity search project
uwmisl/poretitioner
uwmisl/storage-biasing-ncomms20
data and codes for Nature Communicates 2020. Title: Quantifying Molecular Bias in DNA Data Storage
uwmisl/combinatorial_primer_project
uwmisl/Deep-Molecules
Protein Sequence AutoEncoders
uwmisl/dmfwizard
Python library for designing digital microfluidic electrode boards with KiCad
uwmisl/primo-openimages
VGG16-FC2 feature vectors for OpenImagesV4
uwmisl/hamiltonPSD
simple serial protocol wrapper for hamilton PSD pumps.
uwmisl/PorTis
Code repository and replication package for PorTis paper
uwmisl/purpledrop-driver
Python driver and gateway for PurpleDrop USB devices
uwmisl/purpledrop-software
Controller software for the PurpleDrop digital microfluidics platform
uwmisl/purpledrop-stm32
Embedded application to run on PurpleDrop STM32 controller
uwmisl/syn_bio_vis
An interactive tool for teaching and learning molecular programming.
uwmisl/cas9-random-access
Random access of DNA data using Cas9 enrichment and nanopore sequencing
uwmisl/cas9-similarity-search
DNA similarity search using Cas9
uwmisl/electrode_board_template_100x74
KiCad project template for custom electrode boards
uwmisl/HIPified-DTWax
uwmisl/KinDA
Kinetic DNA strand displacement analyzer
uwmisl/mach-nix
Create highly reproducible python environments
uwmisl/pd-electrodeboard-pcb-v4
uwmisl/pd-electrodeboard-pcb-v6
uwmisl/pd-electrodeboard-pcb-v7
Electrode Board Design for the PurpleDrop
uwmisl/pd-frame-50x50
PCB frame for purpledrop electrode board with 50x50mm top plate
uwmisl/pd-frame-50x75
PCB frame for 50x75mm top plate on Purpledrop
uwmisl/pdclient
Python client for purple drop
uwmisl/purpledrop-3dmodels
Repository of 3D printable tools and accessories for building and using PurpleDrop
uwmisl/purpledrop-manual
Source for generating the purpledrop manual