Problem for generating coverage plots
Gregjlt opened this issue · 1 comments
Gregjlt commented
With 11 clusters, this error sometimes appears when generating coverage plots :
Warning in rbind(deparse.level, ...) :
number of columns of result, 5, is not a multiple of vector length 3 of arg 2
Warning: Error in <Anonymous>: error in evaluating the argument 'x' in selecting a method for function 'width':
199: <Anonymous>
198: stop
197: stopWithCondition
196: reactiveStop
195: fun_
194: dotloop
193: req
189: <reactive:coverages> [/home/pprompsy/R/x86_64-pc-linux-gnu-library/4.1/ChromSCape/server.R#2388]
187: .func
184: contextFunc
183: env$runWith
176: ctx$run
175: self$.updateValue
173: coverages
169: renderPlot [/home/pprompsy/R/x86_64-pc-linux-gnu-library/4.1/ChromSCape/server.R#2449]
167: func
127: drawPlot
113: <reactive:plotObj>
97: drawReactive
84: renderFunc
83: output$coverage_region_plot
2: shiny::runApp
1: launchApp
Pacomito commented
Produced a different error when having 12 clusters on another dataset after generating the 12 bigwig files and plotting the default region "chr10:1.5e+07-1.6e+07":
in red in the browser : "Viewport has zero dimension(s)" and
Warning: Error in grid.Call: Viewport has zero dimension(s)
175: recordGraphics
174: grid.draw.gTree
172: gridExtra::grid.arrange
170: plot_coverage_BigWig [/media/pprompsy/Depic_bioinfo_1/InstitutCurie/Documents/GitLab/ChromSCape/R/plotting_functions.R#961]
169: renderPlot [/media/pprompsy/Depic_bioinfo_1/InstitutCurie/Documents/GitLab/ChromSCape/inst/server.R#2449]
167: func
127: drawPlot
113: <reactive:plotObj>
97: drawReactive
84: renderFunc
83: output$coverage_region_plot
2: shiny::runApp
1: launchApp [/media/pprompsy/Depic_bioinfo_1/InstitutCurie/Documents/GitLab/ChromSCape/R/runApp.R#22]