Is it possible to handle long-read RNA-seq data with VAST-TOOL?
happypiggyzjx opened this issue · 1 comments
happypiggyzjx commented
Dear VAST-TOOL Software Development Team，
Greetings! Thank you very much for developing such a great software, and now I have a small question for you: is it possible to handle long-read RNA-seq data with this software? If so, is there anything I should be aware of?
Thank you again for taking time out of your busy schedule to read this email, your professional reply really means a lot to me.
Sincerely，
Happy Piggy
mirimia commented
Hello,
It is technically possible if provided in FQ format, but not recommended.
If you want a similar quantification, exon-based, I recommend using insplico.
Cheers
Manu