vatlab/sos-notebook

cannot import name 'Sequence' from 'collections' (/opt/conda/lib/python3.10/collections/__init__.py)

benwilks opened this issue ยท 10 comments

Getting import error using python3.10 and the %use R command in an sos notebook. It looks like it needs to be from collections.abc import Sequence for python 3.10. I can still run R: from the cell, just not the %use R command. Are there any plans to update support for python 3.10?

BoPeng commented

It should be supported. Could you update your sos-r?

Hi,

Thank you for the quick reply! I installed sos-r with conda install -c conda-forge sos-r and it looks like it installs v0.19.6. I'm still getting the "cannot import name 'Sequence' from 'collections' (/opt/conda/lib/python3.10/collections/init.py)" error though.

I'm using the jupyter/datascience docker as the base container and then installed sos packages with conda/mamba.

packages in environment at /opt/conda:

Name Version Build Channel

_libgcc_mutex 0.1 conda_forge conda-forge
_openmp_mutex 4.5 2_kmp_llvm conda-forge
_r-mutex 1.0.1 anacondar_1 conda-forge
_sysroot_linux-64_curr_repodata_hack 3 h5bd9786_13 conda-forge
aiofiles 22.1.0 pyhd8ed1ab_0 conda-forge
aiosqlite 0.18.0 pyhd8ed1ab_0 conda-forge
alembic 1.10.4 pyhd8ed1ab_0 conda-forge
altair 4.2.2 pyhd8ed1ab_0 conda-forge
ansi2html 1.8.0 py310hff52083_1 conda-forge
ansiwrap 0.8.4 py_0 conda-forge
anyio 3.6.2 pyhd8ed1ab_0 conda-forge
aom 3.5.0 h27087fc_0 conda-forge
argon2-cffi 21.3.0 pyhd8ed1ab_0 conda-forge
argon2-cffi-bindings 21.2.0 py310h5764c6d_3 conda-forge
arrow 1.2.3 pyhd8ed1ab_0 conda-forge
arrow-cpp 11.0.0 ha770c72_14_cpu conda-forge
asttokens 2.2.1 pyhd8ed1ab_0 conda-forge
async_generator 1.10 py_0 conda-forge
atk-1.0 2.38.0 hd4edc92_1 conda-forge
attrs 22.2.0 pyh71513ae_0 conda-forge
autopep8 2.0.2 pyhd8ed1ab_0 conda-forge
aws-c-auth 0.6.26 hf365957_1 conda-forge
aws-c-cal 0.5.21 h48707d8_2 conda-forge
aws-c-common 0.8.14 h0b41bf4_0 conda-forge
aws-c-compression 0.2.16 h03acc5a_5 conda-forge
aws-c-event-stream 0.2.20 h00877a2_4 conda-forge
aws-c-http 0.7.6 hf342b9f_0 conda-forge
aws-c-io 0.13.19 h5b20300_3 conda-forge
aws-c-mqtt 0.8.6 hc4349f7_12 conda-forge
aws-c-s3 0.2.7 h909e904_1 conda-forge
aws-c-sdkutils 0.1.8 h03acc5a_0 conda-forge
aws-checksums 0.1.14 h03acc5a_5 conda-forge
aws-crt-cpp 0.19.8 hf7fbfca_12 conda-forge
aws-sdk-cpp 1.10.57 h17c43bd_8 conda-forge
babel 2.12.1 pyhd8ed1ab_1 conda-forge
backcall 0.2.0 pyh9f0ad1d_0 conda-forge
backports 1.0 pyhd8ed1ab_3 conda-forge
backports.functools_lru_cache 1.6.4 pyhd8ed1ab_0 conda-forge
bash 5.2.15 hfbf034d_0 conda-forge
beautifulsoup4 4.12.2 pyha770c72_0 conda-forge
binutils_impl_linux-64 2.40 hf600244_0 conda-forge
black 23.3.0 py310hff52083_0 conda-forge
blas 2.116 openblas conda-forge
blas-devel 3.9.0 16_linux64_openblas conda-forge
bleach 6.0.0 pyhd8ed1ab_0 conda-forge
blinker 1.6.2 pyhd8ed1ab_0 conda-forge
blosc 1.21.3 hafa529b_0 conda-forge
bokeh 3.1.0 pyhd8ed1ab_0 conda-forge
boltons 23.0.0 pyhd8ed1ab_0 conda-forge
bottleneck 1.3.7 py310h0a54255_0 conda-forge
brotli 1.0.9 h166bdaf_8 conda-forge
brotli-bin 1.0.9 h166bdaf_8 conda-forge
brotli-python 1.0.9 py310hd8f1fbe_8 conda-forge
brotlipy 0.7.0 py310h5764c6d_1005 conda-forge
brunsli 0.1 h9c3ff4c_0 conda-forge
bwidget 1.9.14 ha770c72_1 conda-forge
bzip2 1.0.8 h7f98852_4 conda-forge
c-ares 1.18.1 h7f98852_0 conda-forge
c-blosc2 2.8.0 hf91038e_1 conda-forge
ca-certificates 2022.12.7 ha878542_0 conda-forge
cached-property 1.5.2 hd8ed1ab_1 conda-forge
cached_property 1.5.2 pyha770c72_1 conda-forge
cairo 1.16.0 ha61ee94_1014 conda-forge
calysto_bash 0.2.2 py310hff52083_2 conda-forge
certifi 2022.12.7 pyhd8ed1ab_0 conda-forge
certipy 0.1.3 py_0 conda-forge
cffi 1.15.1 py310h255011f_3 conda-forge
cfitsio 4.2.0 hd9d235c_0 conda-forge
charls 2.4.1 hcb278e6_0 conda-forge
charset-normalizer 3.1.0 pyhd8ed1ab_0 conda-forge
click 8.1.3 unix_pyhd8ed1ab_2 conda-forge
cloudpickle 2.2.1 pyhd8ed1ab_0 conda-forge
colorama 0.4.6 pyhd8ed1ab_0 conda-forge
comm 0.1.3 pyhd8ed1ab_0 conda-forge
conda 23.3.1 py310hff52083_0 conda-forge
conda-package-handling 2.0.2 pyh38be061_0 conda-forge
conda-package-streaming 0.7.0 pyhd8ed1ab_1 conda-forge
configurable-http-proxy 4.5.4 h3b247e2_2 conda-forge
contourpy 1.0.7 py310hdf3cbec_0 conda-forge
cryptography 40.0.2 py310h34c0648_0 conda-forge
curl 8.0.1 h588be90_0 conda-forge
cycler 0.11.0 pyhd8ed1ab_0 conda-forge
cython 0.29.34 py310heca2aa9_0 conda-forge
cytoolz 0.12.0 py310h5764c6d_1 conda-forge
dash 2.9.3 pyhd8ed1ab_0 conda-forge
dask 2023.4.0 pyhd8ed1ab_0 conda-forge
dask-core 2023.4.0 pyhd8ed1ab_0 conda-forge
dav1d 1.0.0 h166bdaf_1 conda-forge
debugpy 1.6.7 py310heca2aa9_0 conda-forge
decorator 5.1.1 pyhd8ed1ab_0 conda-forge
defusedxml 0.7.1 pyhd8ed1ab_0 conda-forge
dill 0.3.6 pyhd8ed1ab_1 conda-forge
distributed 2023.4.0 pyhd8ed1ab_0 conda-forge
entrypoints 0.4 pyhd8ed1ab_0 conda-forge
et_xmlfile 1.1.0 pyhd8ed1ab_0 conda-forge
executing 1.2.0 pyhd8ed1ab_0 conda-forge
expat 2.5.0 hcb278e6_1 conda-forge
fasteners 0.17.3 pyhd8ed1ab_0 conda-forge
feather-format 0.4.1 pyh9f0ad1d_0 conda-forge
flask 2.2.3 pyhd8ed1ab_0 conda-forge
flask-compress 1.13 pyhd8ed1ab_0 conda-forge
flit-core 3.8.0 pyhd8ed1ab_0 conda-forge
fmt 9.1.0 h924138e_0 conda-forge
font-ttf-dejavu-sans-mono 2.37 hab24e00_0 conda-forge
font-ttf-inconsolata 3.000 h77eed37_0 conda-forge
font-ttf-source-code-pro 2.038 h77eed37_0 conda-forge
font-ttf-ubuntu 0.83 hab24e00_0 conda-forge
fontconfig 2.14.2 h14ed4e7_0 conda-forge
fonts-conda-ecosystem 1 0 conda-forge
fonts-conda-forge 1 0 conda-forge
fonttools 4.39.3 py310h1fa729e_0 conda-forge
fqdn 1.5.1 pyhd8ed1ab_0 conda-forge
freetype 2.12.1 hca18f0e_1 conda-forge
fribidi 1.0.10 h36c2ea0_0 conda-forge
fsspec 2023.4.0 pyh1a96a4e_0 conda-forge
gcc_impl_linux-64 12.2.0 hcc96c02_19 conda-forge
gdk-pixbuf 2.42.10 h05c8ddd_0 conda-forge
gettext 0.21.1 h27087fc_0 conda-forge
gflags 2.2.2 he1b5a44_1004 conda-forge
gfortran_impl_linux-64 12.2.0 h55be85b_19 conda-forge
gh 2.25.1 ha8f183a_0 conda-forge
giflib 5.2.1 h0b41bf4_3 conda-forge
git 2.40.0 pl5321h3ca6407_1 conda-forge
gitdb 4.0.10 pyhd8ed1ab_0 conda-forge
gitpython 3.1.31 pyhd8ed1ab_0 conda-forge
glog 0.6.0 h6f12383_0 conda-forge
gmp 6.2.1 h58526e2_0 conda-forge
gmpy2 2.1.2 py310h3ec546c_1 conda-forge
graphite2 1.3.13 h58526e2_1001 conda-forge
graphviz 2.50.0 h5abf519_3 conda-forge
greenlet 2.0.2 py310heca2aa9_0 conda-forge
gsl 2.7 he838d99_0 conda-forge
gtk2 2.24.33 h90689f9_2 conda-forge
gts 0.7.6 h64030ff_2 conda-forge
gxx_impl_linux-64 12.2.0 hcc96c02_19 conda-forge
h5py 3.8.0 nompi_py310ha66b2ad_101 conda-forge
harfbuzz 6.0.0 h8e241bc_0 conda-forge
hdf5 1.14.0 nompi_hb72d44e_103 conda-forge
icu 70.1 h27087fc_0 conda-forge
idna 3.4 pyhd8ed1ab_0 conda-forge
imagecodecs 2023.1.23 py310ha3ed6a1_0 conda-forge
imageio 2.28.0 pyh24c5eb1_0 conda-forge
importlib-metadata 6.6.0 pyha770c72_0 conda-forge
importlib_metadata 6.6.0 hd8ed1ab_0 conda-forge
importlib_resources 5.12.0 pyhd8ed1ab_0 conda-forge
ipykernel 6.22.0 pyh210e3f2_0 conda-forge
ipympl 0.9.3 pyhd8ed1ab_0 conda-forge
ipyparallel 8.6.1 pyhd8ed1ab_0 conda-forge
ipython 8.12.0 pyh41d4057_0 conda-forge
ipython_genutils 0.2.0 py_1 conda-forge
ipywidgets 8.0.6 pyhd8ed1ab_0 conda-forge
isoduration 20.11.0 pyhd8ed1ab_0 conda-forge
isort 5.12.0 pyhd8ed1ab_1 conda-forge
itsdangerous 2.1.2 pyhd8ed1ab_0 conda-forge
jedi 0.18.2 pyhd8ed1ab_0 conda-forge
jinja2 3.1.2 pyhd8ed1ab_1 conda-forge
joblib 1.2.0 pyhd8ed1ab_0 conda-forge
jpeg 9e h166bdaf_2 conda-forge
json5 0.9.5 pyh9f0ad1d_0 conda-forge
jsonpatch 1.32 pyhd8ed1ab_0 conda-forge
jsonpointer 2.0 py_0 conda-forge
jsonschema 4.17.3 pyhd8ed1ab_0 conda-forge
jsonschema-with-format-nongpl 4.17.3 pyhd8ed1ab_0 conda-forge
jupyter-dash 0.4.2 pyhd8ed1ab_1 conda-forge
jupyter-server-mathjax 0.2.6 pyh5bfe37b_1 conda-forge
jupyter_client 8.2.0 pyhd8ed1ab_0 conda-forge
jupyter_core 5.3.0 py310hff52083_0 conda-forge
jupyter_events 0.6.3 pyhd8ed1ab_0 conda-forge
jupyter_server 2.5.0 pyhd8ed1ab_0 conda-forge
jupyter_server_fileid 0.9.0 pyhd8ed1ab_0 conda-forge
jupyter_server_terminals 0.4.4 pyhd8ed1ab_1 conda-forge
jupyter_server_ydoc 0.8.0 pyhd8ed1ab_0 conda-forge
jupyter_telemetry 0.1.0 pyhd8ed1ab_1 conda-forge
jupyter_ydoc 0.2.3 pyhd8ed1ab_0 conda-forge
jupyterhub 4.0.0 pyh2a2186d_0 conda-forge
jupyterhub-base 4.0.0 pyh2a2186d_0 conda-forge
jupyterlab 3.6.3 pyhd8ed1ab_0 conda-forge
jupyterlab-git 0.41.0 pyhd8ed1ab_1 conda-forge
jupyterlab-sos 0.8.8 ha770c72_0 conda-forge
jupyterlab-transient-display-data 0.4.3 pyhc268e32_0 conda-forge
jupyterlab_code_formatter 1.6.0 pyhd8ed1ab_0 conda-forge
jupyterlab_pygments 0.2.2 pyhd8ed1ab_0 conda-forge
jupyterlab_server 2.22.1 pyhd8ed1ab_0 conda-forge
jupyterlab_sos 0.8.8 pyh76afe40_0 conda-forge
jupyterlab_widgets 3.0.7 pyhd8ed1ab_0 conda-forge
jxrlib 1.1 h7f98852_2 conda-forge
kernel-headers_linux-64 3.10.0 h4a8ded7_13 conda-forge
keyutils 1.6.1 h166bdaf_0 conda-forge
kiwisolver 1.4.4 py310hbf28c38_1 conda-forge
krb5 1.20.1 h81ceb04_0 conda-forge
lazy_loader 0.2 pyhd8ed1ab_0 conda-forge
lcms2 2.15 hfd0df8a_0 conda-forge
ld_impl_linux-64 2.40 h41732ed_0 conda-forge
lerc 4.0.0 h27087fc_0 conda-forge
libabseil 20230125.0 cxx17_hcb278e6_1 conda-forge
libaec 1.0.6 hcb278e6_1 conda-forge
libarchive 3.6.2 h3d51595_0 conda-forge
libarrow 11.0.0 h93537a5_14_cpu conda-forge
libavif 0.11.1 h5cdd6b5_0 conda-forge
libblas 3.9.0 16_linux64_openblas conda-forge
libbrotlicommon 1.0.9 h166bdaf_8 conda-forge
libbrotlidec 1.0.9 h166bdaf_8 conda-forge
libbrotlienc 1.0.9 h166bdaf_8 conda-forge
libcblas 3.9.0 16_linux64_openblas conda-forge
libcrc32c 1.1.2 h9c3ff4c_0 conda-forge
libcurl 8.0.1 h588be90_0 conda-forge
libdeflate 1.17 h0b41bf4_0 conda-forge
libedit 3.1.20191231 he28a2e2_2 conda-forge
libev 4.33 h516909a_1 conda-forge
libevent 2.1.10 h28343ad_4 conda-forge
libexpat 2.5.0 hcb278e6_1 conda-forge
libffi 3.4.2 h7f98852_5 conda-forge
libgcc-devel_linux-64 12.2.0 h3b97bd3_19 conda-forge
libgcc-ng 12.2.0 h65d4601_19 conda-forge
libgd 2.3.3 h695aa2c_1 defaults
libgfortran-ng 12.2.0 h69a702a_19 conda-forge
libgfortran5 12.2.0 h337968e_19 conda-forge
libgit2 1.6.4 h747ad27_0 conda-forge
libglib 2.76.2 hebfc3b9_0 conda-forge
libgomp 12.2.0 h65d4601_19 conda-forge
libgoogle-cloud 2.8.0 h0bc5f78_1 conda-forge
libgrpc 1.52.1 hcf146ea_1 conda-forge
libiconv 1.17 h166bdaf_0 conda-forge
libjpeg-turbo 2.1.4 h166bdaf_0 conda-forge
liblapack 3.9.0 16_linux64_openblas conda-forge
liblapacke 3.9.0 16_linux64_openblas conda-forge
libllvm11 11.1.0 he0ac6c6_5 conda-forge
libmamba 1.4.2 hcea66bb_0 conda-forge
libmambapy 1.4.2 py310h1428755_0 conda-forge
libnghttp2 1.52.0 h61bc06f_0 conda-forge
libnsl 2.0.0 h7f98852_0 conda-forge
libnuma 2.0.16 h0b41bf4_1 conda-forge
libopenblas 0.3.21 pthreads_h78a6416_3 conda-forge
libpng 1.6.39 h753d276_0 conda-forge
libprotobuf 3.21.12 h3eb15da_0 conda-forge
librsvg 2.54.4 h7abd40a_0 conda-forge
libsanitizer 12.2.0 h46fd767_19 conda-forge
libsodium 1.0.18 h36c2ea0_1 conda-forge
libsolv 0.7.23 h3eb15da_0 conda-forge
libsqlite 3.40.0 h753d276_1 conda-forge
libssh2 1.10.0 hf14f497_3 conda-forge
libstdcxx-devel_linux-64 12.2.0 h3b97bd3_19 conda-forge
libstdcxx-ng 12.2.0 h46fd767_19 conda-forge
libthrift 0.18.1 h5e4af38_0 conda-forge
libtiff 4.5.0 h6adf6a1_2 conda-forge
libtool 2.4.7 h27087fc_0 conda-forge
libutf8proc 2.8.0 h166bdaf_0 conda-forge
libuuid 2.38.1 h0b41bf4_0 conda-forge
libuv 1.44.2 h166bdaf_0 conda-forge
libwebp-base 1.3.0 h0b41bf4_0 conda-forge
libxcb 1.13 h7f98852_1004 conda-forge
libxml2 2.10.3 hca2bb57_4 conda-forge
libzlib 1.2.13 h166bdaf_4 conda-forge
libzopfli 1.0.3 h9c3ff4c_0 conda-forge
llvm-openmp 16.0.2 h4dfa4b3_0 conda-forge
llvmlite 0.39.1 py310h58363a5_1 conda-forge
locket 1.0.0 pyhd8ed1ab_0 conda-forge
lz4 4.3.2 py310h0cfdcf0_0 conda-forge
lz4-c 1.9.4 hcb278e6_0 conda-forge
lzo 2.10 h516909a_1000 conda-forge
make 4.3 hd18ef5c_1 conda-forge
mako 1.2.4 pyhd8ed1ab_0 conda-forge
mamba 1.4.2 py310h51d5547_0 conda-forge
markdown 3.4.3 pyhd8ed1ab_0 conda-forge
markupsafe 2.1.2 py310h1fa729e_0 conda-forge
matplotlib-base 3.7.1 py310he60537e_0 conda-forge
matplotlib-inline 0.1.6 pyhd8ed1ab_0 conda-forge
metakernel 0.29.4 pyhd8ed1ab_0 conda-forge
mistune 2.0.5 pyhd8ed1ab_0 conda-forge
mpc 1.3.1 hfe3b2da_0 conda-forge
mpfr 4.2.0 hb012696_0 conda-forge
mpmath 1.3.0 pyhd8ed1ab_0 conda-forge
msgpack-python 1.0.5 py310hdf3cbec_0 conda-forge
munkres 1.1.4 pyh9f0ad1d_0 conda-forge
mypy_extensions 1.0.0 pyha770c72_0 conda-forge
nb_conda 2.2.1 unix_6 conda-forge
nb_conda_kernels 2.3.1 py310hff52083_2 conda-forge
nbclassic 0.5.5 pyhb4ecaf3_1 conda-forge
nbclient 0.7.3 pyhd8ed1ab_0 conda-forge
nbconvert 7.3.1 pyhd8ed1ab_0 conda-forge
nbconvert-core 7.3.1 pyhd8ed1ab_0 conda-forge
nbconvert-pandoc 7.3.1 pyhd8ed1ab_0 conda-forge
nbdime 3.2.0 pyhd8ed1ab_0 conda-forge
nbformat 5.8.0 pyhd8ed1ab_0 conda-forge
ncurses 6.3 h27087fc_1 conda-forge
nest-asyncio 1.5.6 pyhd8ed1ab_0 conda-forge
networkx 3.1 pyhd8ed1ab_0 conda-forge
nodejs 16.19.0 h8d033a5_0 conda-forge
nomkl 1.0 h5ca1d4c_0 conda-forge
notebook 6.5.4 pyha770c72_0 conda-forge
notebook-shim 0.2.3 pyhd8ed1ab_0 conda-forge
numba 0.56.4 py310h0e39c9b_1 conda-forge
numexpr 2.8.4 py310h690d005_100 conda-forge
numpy 1.23.5 py310h53a5b5f_0 conda-forge
oauthlib 3.2.2 pyhd8ed1ab_0 conda-forge
openblas 0.3.21 pthreads_h320a7e8_3 conda-forge
openjpeg 2.5.0 hfec8fc6_2 conda-forge
openpyxl 3.1.1 py310h1fa729e_0 conda-forge
openssl 3.1.0 hd590300_2 conda-forge
orc 1.8.3 hfdbbad2_0 conda-forge
packaging 23.1 pyhd8ed1ab_0 conda-forge
pamela 1.0.0 py_0 conda-forge
pandas 2.0.1 py310h7cbd5c2_0 conda-forge
pandoc 2.19.2 h32600fe_2 conda-forge
pandocfilters 1.5.0 pyhd8ed1ab_0 conda-forge
pango 1.50.14 hd33c08f_0 conda-forge
papermill 2.3.4 pyhd8ed1ab_0 conda-forge
parquet-cpp 1.5.1 2 conda-forge
parso 0.8.3 pyhd8ed1ab_0 conda-forge
partd 1.4.0 pyhd8ed1ab_0 conda-forge
pathspec 0.11.1 pyhd8ed1ab_0 conda-forge
patsy 0.5.3 pyhd8ed1ab_0 conda-forge
pcre2 10.40 hc3806b6_0 conda-forge
perl 5.32.1 2_h7f98852_perl5 conda-forge
pexpect 4.8.0 pyh1a96a4e_2 conda-forge
pickleshare 0.7.5 py_1003 conda-forge
pillow 9.4.0 py310h023d228_1 conda-forge
pip 23.1.1 pyhd8ed1ab_0 conda-forge
pixman 0.40.0 h36c2ea0_0 conda-forge
pkgutil-resolve-name 1.3.10 pyhd8ed1ab_0 conda-forge
platformdirs 3.2.0 pyhd8ed1ab_0 conda-forge
plotly 5.14.1 pyhd8ed1ab_0 conda-forge
pluggy 1.0.0 pyhd8ed1ab_5 conda-forge
pooch 1.7.0 pyha770c72_3 conda-forge
portalocker 2.7.0 py310hff52083_0 conda-forge
prometheus_client 0.16.0 pyhd8ed1ab_0 conda-forge
prompt-toolkit 3.0.38 pyha770c72_0 conda-forge
prompt_toolkit 3.0.38 hd8ed1ab_0 conda-forge
protobuf 4.21.12 py310heca2aa9_0 conda-forge
psutil 5.9.5 py310h1fa729e_0 conda-forge
pthread-stubs 0.4 h36c2ea0_1001 conda-forge
ptyprocess 0.7.0 pyhd3deb0d_0 conda-forge
pure_eval 0.2.2 pyhd8ed1ab_0 conda-forge
py-cpuinfo 9.0.0 pyhd8ed1ab_0 conda-forge
pyarrow 11.0.0 py310h633f555_14_cpu conda-forge
pybind11-abi 4 hd8ed1ab_3 conda-forge
pycodestyle 2.10.0 pyhd8ed1ab_0 conda-forge
pycosat 0.6.4 py310h5764c6d_1 conda-forge
pycparser 2.21 pyhd8ed1ab_0 conda-forge
pycurl 7.45.1 py310h60f9ec7_3 conda-forge
pydot 1.4.2 py310hff52083_3 conda-forge
pydotplus 2.0.2 pyhaef67bd_5 conda-forge
pygments 2.15.1 pyhd8ed1ab_0 conda-forge
pyjwt 2.6.0 pyhd8ed1ab_0 conda-forge
pyopenssl 23.1.1 pyhd8ed1ab_0 conda-forge
pyparsing 3.0.9 pyhd8ed1ab_0 conda-forge
pyrsistent 0.19.3 py310h1fa729e_0 conda-forge
pysocks 1.7.1 pyha2e5f31_6 conda-forge
pytables 3.8.0 py310hde6a235_1 conda-forge
python 3.10.10 he550d4f_0_cpython conda-forge
python-dateutil 2.8.2 pyhd8ed1ab_0 conda-forge
python-fastjsonschema 2.16.3 pyhd8ed1ab_0 conda-forge
python-graphviz 0.20.1 pyh22cad53_0 conda-forge
python-json-logger 2.0.7 pyhd8ed1ab_0 conda-forge
python-tzdata 2023.3 pyhd8ed1ab_0 conda-forge
python-xxhash 3.2.0 py310h1fa729e_0 conda-forge
python_abi 3.10 3_cp310 conda-forge
pytz 2023.3 pyhd8ed1ab_0 conda-forge
pytz-deprecation-shim 0.1.0.post0 py310hff52083_3 conda-forge
pywavelets 1.4.1 py310h0a54255_0 conda-forge
pyyaml 6.0 py310h5764c6d_5 conda-forge
pyzmq 25.0.2 py310h059b190_0 conda-forge
r-askpass 1.1 r42h06615bd_3 conda-forge
r-assertthat 0.2.1 r42hc72bb7e_3 conda-forge
r-backports 1.4.1 r42h06615bd_1 conda-forge
r-base 4.2.3 ha7d60f8_0 conda-forge
r-base64enc 0.1_3 r42h06615bd_1005 conda-forge
r-bit 4.0.5 r42h06615bd_0 conda-forge
r-bit64 4.0.5 r42h06615bd_1 conda-forge
r-bitops 1.0_7 r42h06615bd_1 conda-forge
r-blob 1.2.4 r42hc72bb7e_0 conda-forge
r-brew 1.0_8 r42hc72bb7e_1 conda-forge
r-brio 1.1.3 r42h06615bd_1 conda-forge
r-broom 1.0.4 r42hc72bb7e_0 conda-forge
r-bslib 0.4.2 r42hc72bb7e_0 conda-forge
r-cachem 1.0.7 r42h133d619_0 conda-forge
r-callr 3.7.3 r42hc72bb7e_0 conda-forge
r-caret 6.0_94 r42h133d619_0 conda-forge
r-cellranger 1.1.0 r42hc72bb7e_1005 conda-forge
r-class 7.3_21 r42h133d619_0 conda-forge
r-cli 3.6.1 r42h38f115c_0 conda-forge
r-clipr 0.8.0 r42hc72bb7e_1 conda-forge
r-clock 0.6.1 r42h7525677_1 conda-forge
r-codetools 0.2_19 r42hc72bb7e_0 conda-forge
r-colorspace 2.1_0 r42h133d619_0 conda-forge
r-commonmark 1.9.0 r42h133d619_0 conda-forge
r-conflicted 1.2.0 r42h785f33e_0 conda-forge
r-cpp11 0.4.3 r42hc72bb7e_0 conda-forge
r-crayon 1.5.2 r42hc72bb7e_1 conda-forge
r-credentials 1.3.2 r42hc72bb7e_1 conda-forge
r-curl 4.3.3 r42h06615bd_1 conda-forge
r-data.table 1.14.8 r42h133d619_0 conda-forge
r-dbi 1.1.3 r42hc72bb7e_1 conda-forge
r-dbplyr 2.3.2 r42hc72bb7e_0 conda-forge
r-desc 1.4.2 r42hc72bb7e_1 conda-forge
r-devtools 2.4.5 r42hc72bb7e_1 conda-forge
r-diagram 1.6.5 r42ha770c72_1 conda-forge
r-dials 1.2.0 r42hc72bb7e_0 conda-forge
r-dicedesign 1.9 r42h133d619_1 conda-forge
r-diffobj 0.3.5 r42h06615bd_1 conda-forge
r-digest 0.6.31 r42h38f115c_0 conda-forge
r-downlit 0.4.2 r42hc72bb7e_1 conda-forge
r-dplyr 1.1.2 r42ha503ecb_0 conda-forge
r-dtplyr 1.3.1 r42hc72bb7e_0 conda-forge
r-e1071 1.7_13 r42h38f115c_0 conda-forge
r-ellipsis 0.3.2 r42h06615bd_1 conda-forge
r-evaluate 0.20 r42hc72bb7e_0 conda-forge
r-fansi 1.0.4 r42h133d619_0 conda-forge
r-farver 2.1.1 r42h7525677_1 conda-forge
r-fastmap 1.1.1 r42h38f115c_0 conda-forge
r-feather 0.3.5 r42h7525677_2 conda-forge
r-fontawesome 0.5.1 r42hc72bb7e_0 conda-forge
r-forcats 1.0.0 r42hc72bb7e_0 conda-forge
r-foreach 1.5.2 r42hc72bb7e_1 conda-forge
r-forecast 8.21 r42hbf9dc1e_0 conda-forge
r-fracdiff 1.5_2 r42h64d53c3_0 conda-forge
r-fs 1.6.1 r42h38f115c_0 conda-forge
r-furrr 0.3.1 r42hc72bb7e_1 conda-forge
r-future 1.32.0 r42hc72bb7e_0 conda-forge
r-future.apply 1.10.0 r42hc72bb7e_0 conda-forge
r-gargle 1.4.0 r42h785f33e_0 conda-forge
r-generics 0.1.3 r42hc72bb7e_1 conda-forge
r-gert 1.9.2 r42h492061e_1 conda-forge
r-ggplot2 3.4.2 r42hc72bb7e_0 conda-forge
r-gh 1.4.0 r42hc72bb7e_0 conda-forge
r-gitcreds 0.1.2 r42hc72bb7e_1 conda-forge
r-globals 0.16.2 r42hc72bb7e_0 conda-forge
r-glue 1.6.2 r42h06615bd_1 conda-forge
r-googledrive 2.1.0 r42hc72bb7e_0 conda-forge
r-googlesheets4 1.1.0 r42h785f33e_0 conda-forge
r-gower 1.0.1 r42h133d619_0 conda-forge
r-gpfit 1.0_8 r42hc72bb7e_2 conda-forge
r-gtable 0.3.3 r42hc72bb7e_0 conda-forge
r-hardhat 1.3.0 r42hc72bb7e_0 conda-forge
r-haven 2.5.2 r42h38f115c_0 conda-forge
r-hexbin 1.28.3 r42hac0b197_0 conda-forge
r-highr 0.10 r42hc72bb7e_0 conda-forge
r-hms 1.1.3 r42hc72bb7e_0 conda-forge
r-htmltools 0.5.5 r42h38f115c_0 conda-forge
r-htmlwidgets 1.6.2 r42hc72bb7e_0 conda-forge
r-httpuv 1.6.9 r42h38f115c_0 conda-forge
r-httr 1.4.5 r42hc72bb7e_0 conda-forge
r-httr2 0.2.2 r42hc72bb7e_1 conda-forge
r-ids 1.0.1 r42hc72bb7e_2 conda-forge
r-infer 1.0.4 r42hc72bb7e_0 conda-forge
r-ini 0.3.1 r42hc72bb7e_1004 conda-forge
r-ipred 0.9_14 r42h133d619_0 conda-forge
r-irdisplay 1.1 r42hd8ed1ab_1 conda-forge
r-irkernel 1.3.2 r42h785f33e_0 conda-forge
r-isoband 0.2.7 r42h38f115c_1 conda-forge
r-iterators 1.0.14 r42hc72bb7e_1 conda-forge
r-jquerylib 0.1.4 r42hc72bb7e_1 conda-forge
r-jsonlite 1.8.4 r42h133d619_0 conda-forge
r-kernsmooth 2.23_20 r42hd009a43_1 conda-forge
r-knitr 1.42 r42hc72bb7e_1 conda-forge
r-labeling 0.4.2 r42hc72bb7e_2 conda-forge
r-later 1.3.0 r42h7525677_1 conda-forge
r-lattice 0.21_8 r42h133d619_0 conda-forge
r-lava 1.7.2.1 r42hc72bb7e_0 conda-forge
r-lhs 1.1.6 r42h38f115c_0 conda-forge
r-lifecycle 1.0.3 r42hc72bb7e_1 conda-forge
r-listenv 0.9.0 r42hc72bb7e_0 conda-forge
r-lmtest 0.9_40 r42h8da6f51_1 conda-forge
r-lubridate 1.9.2 r42h133d619_1 conda-forge
r-magrittr 2.0.3 r42h06615bd_1 conda-forge
r-mass 7.3_59 r42h57805ef_0 conda-forge
r-matrix 1.5_4 r42he1ae0d6_0 conda-forge
r-memoise 2.0.1 r42hc72bb7e_1 conda-forge
r-mgcv 1.8_42 r42he1ae0d6_0 conda-forge
r-mime 0.12 r42h06615bd_1 conda-forge
r-miniui 0.1.1.1 r42hc72bb7e_1003 conda-forge
r-modeldata 1.1.0 r42hc72bb7e_0 conda-forge
r-modelenv 0.1.1 r42hc72bb7e_0 conda-forge
r-modelmetrics 1.2.2.2 r42h7525677_2 conda-forge
r-modelr 0.1.11 r42hc72bb7e_0 conda-forge
r-munsell 0.5.0 r42hc72bb7e_1005 conda-forge
r-nlme 3.1_162 r42hac0b197_0 conda-forge
r-nnet 7.3_18 r42h06615bd_1 conda-forge
r-numderiv 2016.8_1.1 r42hc72bb7e_4 conda-forge
r-nycflights13 1.0.2 r42hc72bb7e_1 conda-forge
r-openssl 2.0.6 r42habfbb5e_0 conda-forge
r-parallelly 1.35.0 r42hc72bb7e_0 conda-forge
r-parsnip 1.1.0 r42hc72bb7e_0 conda-forge
r-patchwork 1.1.2 r42hc72bb7e_1 conda-forge
r-pbdzmq 0.3_9 r42hfae1697_0 conda-forge
r-pillar 1.9.0 r42hc72bb7e_0 conda-forge
r-pkgbuild 1.4.0 r42hc72bb7e_0 conda-forge
r-pkgconfig 2.0.3 r42hc72bb7e_2 conda-forge
r-pkgdown 2.0.7 r42hc72bb7e_0 conda-forge
r-pkgload 1.3.2 r42hc72bb7e_0 conda-forge
r-plogr 0.2.0 r42hc72bb7e_1004 conda-forge
r-plyr 1.8.8 r42h7525677_0 conda-forge
r-praise 1.0.0 r42hc72bb7e_1006 conda-forge
r-prettyunits 1.1.1 r42hc72bb7e_2 conda-forge
r-proc 1.18.0 r42h7525677_1 conda-forge
r-processx 3.8.1 r42h133d619_0 conda-forge
r-prodlim 2023.03.31 r42h38f115c_0 conda-forge
r-profvis 0.3.7 r42h06615bd_1 conda-forge
r-progress 1.2.2 r42hc72bb7e_3 conda-forge
r-progressr 0.13.0 r42hc72bb7e_0 conda-forge
r-promises 1.2.0.1 r42h7525677_1 conda-forge
r-proxy 0.4_27 r42h06615bd_1 conda-forge
r-ps 1.7.5 r42h133d619_0 conda-forge
r-purrr 1.0.1 r42h133d619_0 conda-forge
r-quadprog 1.5_8 r42hd009a43_4 conda-forge
r-quantmod 0.4.22 r42hc72bb7e_0 conda-forge
r-r6 2.5.1 r42hc72bb7e_1 conda-forge
r-ragg 1.2.5 r42hd65d3ba_0 conda-forge
r-randomforest 4.7_1.1 r42h8da6f51_1 conda-forge
r-rappdirs 0.3.3 r42h06615bd_1 conda-forge
r-rcmdcheck 1.4.0 r42h785f33e_1 conda-forge
r-rcolorbrewer 1.1_3 r42h785f33e_1 conda-forge
r-rcpp 1.0.10 r42h38f115c_0 conda-forge
r-rcpparmadillo 0.12.2.0.0 r42h358215d_0 conda-forge
r-rcurl 1.98_1.12 r42h133d619_0 conda-forge
r-readr 2.1.4 r42h38f115c_0 conda-forge
r-readxl 1.4.2 r42h81ef4d7_0 conda-forge
r-recipes 1.0.5 r42hc72bb7e_0 conda-forge
r-rematch 1.0.1 r42hc72bb7e_1005 conda-forge
r-rematch2 2.1.2 r42hc72bb7e_2 conda-forge
r-remotes 2.4.2 r42hc72bb7e_1 conda-forge
r-repr 1.1.6 r42h785f33e_0 conda-forge
r-reprex 2.0.2 r42hc72bb7e_1 conda-forge
r-reshape2 1.4.4 r42h7525677_2 conda-forge
r-rlang 1.1.0 r42h38f115c_0 conda-forge
r-rmarkdown 2.21 r42hc72bb7e_0 conda-forge
r-rodbc 1.3_20 r42h133d619_0 conda-forge
r-roxygen2 7.2.3 r42h38f115c_0 conda-forge
r-rpart 4.1.19 r42h06615bd_0 conda-forge
r-rprojroot 2.0.3 r42hc72bb7e_1 conda-forge
r-rsample 1.1.1 r42hc72bb7e_1 conda-forge
r-rsqlite 2.3.1 r42h38f115c_0 conda-forge
r-rstudioapi 0.14 r42hc72bb7e_1 conda-forge
r-rversions 2.1.2 r42hc72bb7e_1 conda-forge
r-rvest 1.0.3 r42hc72bb7e_1 conda-forge
r-sass 0.4.5 r42h38f115c_0 conda-forge
r-scales 1.2.1 r42hc72bb7e_1 conda-forge
r-selectr 0.4_2 r42hc72bb7e_2 conda-forge
r-sessioninfo 1.2.2 r42hc72bb7e_1 conda-forge
r-shape 1.4.6 r42ha770c72_1 conda-forge
r-shiny 1.7.4 r42h785f33e_0 conda-forge
r-slider 0.3.0 r42h133d619_0 conda-forge
r-sourcetools 0.1.7_1 r42h38f115c_0 conda-forge
r-squarem 2021.1 r42hc72bb7e_1 conda-forge
r-stringi 1.7.12 r42h1ae9187_0 conda-forge
r-stringr 1.5.0 r42h785f33e_0 conda-forge
r-survival 3.5_5 r42h133d619_0 conda-forge
r-sys 3.4.1 r42h06615bd_0 conda-forge
r-systemfonts 1.0.4 r42h0ff29ef_1 conda-forge
r-testthat 3.1.7 r42h38f115c_0 conda-forge
r-textshaping 0.3.6 r42hbb20487_4 conda-forge
r-tibble 3.2.1 r42h133d619_1 conda-forge
r-tidymodels 1.0.0 r42hc72bb7e_2 conda-forge
r-tidyr 1.3.0 r42h38f115c_0 conda-forge
r-tidyselect 1.2.0 r42hc72bb7e_0 conda-forge
r-tidyverse 2.0.0 r42h785f33e_0 conda-forge
r-timechange 0.2.0 r42h38f115c_0 conda-forge
r-timedate 4022.108 r42hc72bb7e_0 conda-forge
r-tinytex 0.45 r42hc72bb7e_0 conda-forge
r-tseries 0.10_53 r42h0b340dd_0 conda-forge
r-ttr 0.24.3 r42h06615bd_1 conda-forge
r-tune 1.1.1 r42hc72bb7e_0 conda-forge
r-tzdb 0.3.0 r42h7525677_1 conda-forge
r-urca 1.3_3 r42h8da6f51_0 conda-forge
r-urlchecker 1.0.1 r42hc72bb7e_1 conda-forge
r-usethis 2.1.6 r42hc72bb7e_1 conda-forge
r-utf8 1.2.3 r42h133d619_0 conda-forge
r-uuid 1.1_0 r42h06615bd_1 conda-forge
r-vctrs 0.6.2 r42ha503ecb_0 conda-forge
r-viridislite 0.4.1 r42hc72bb7e_1 conda-forge
r-vroom 1.6.1 r42h38f115c_0 conda-forge
r-waldo 0.4.0 r42hc72bb7e_1 conda-forge
r-warp 0.2.0 r42h133d619_2 conda-forge
r-whisker 0.4.1 r42hc72bb7e_0 conda-forge
r-withr 2.5.0 r42hc72bb7e_1 conda-forge
r-workflows 1.1.3 r42hc72bb7e_0 conda-forge
r-workflowsets 1.0.1 r42hc72bb7e_0 conda-forge
r-xfun 0.39 r42ha503ecb_0 conda-forge
r-xml2 1.3.3 r42h044e5c7_2 conda-forge
r-xopen 1.0.0 r42hc72bb7e_1004 conda-forge
r-xtable 1.8_4 r42hc72bb7e_4 conda-forge
r-xts 0.13.1 r42h133d619_0 conda-forge
r-yaml 2.3.7 r42h133d619_0 conda-forge
r-yardstick 1.2.0 r42h57805ef_0 conda-forge
r-zip 2.3.0 r42h133d619_0 conda-forge
r-zoo 1.8_12 r42h133d619_0 conda-forge
re2 2023.02.02 hcb278e6_0 conda-forge
readline 8.2 h8228510_1 conda-forge
reproc 14.2.4 h0b41bf4_0 conda-forge
reproc-cpp 14.2.4 hcb278e6_0 conda-forge
requests 2.28.2 pyhd8ed1ab_1 conda-forge
retrying 1.3.3 py_2 conda-forge
rfc3339-validator 0.1.4 pyhd8ed1ab_0 conda-forge
rfc3986-validator 0.1.1 pyh9f0ad1d_0 conda-forge
rpy2 3.5.11 py310r42h0a54255_0 conda-forge
ruamel.yaml 0.17.21 py310h1fa729e_3 conda-forge
ruamel.yaml.clib 0.2.7 py310h1fa729e_1 conda-forge
s2n 1.3.41 h3358134_0 conda-forge
scikit-image 0.20.0 py310h9b08913_1 conda-forge
scikit-learn 1.2.2 py310h41b6a48_1 conda-forge
scipy 1.10.1 py310h8deb116_0 conda-forge
seaborn 0.12.2 hd8ed1ab_0 conda-forge
seaborn-base 0.12.2 pyhd8ed1ab_0 conda-forge
sed 4.8 he412f7d_0 conda-forge
send2trash 1.8.0 pyhd8ed1ab_0 conda-forge
setuptools 67.7.2 pyhd8ed1ab_0 conda-forge
simplegeneric 0.8.1 py_1 conda-forge
six 1.16.0 pyh6c4a22f_0 conda-forge
smmap 3.0.5 pyh44b312d_0 conda-forge
snappy 1.1.10 h9fff704_0 conda-forge
sniffio 1.3.0 pyhd8ed1ab_0 conda-forge
sortedcontainers 2.4.0 pyhd8ed1ab_0 conda-forge
sos 0.24.0 pyhd8ed1ab_0 conda-forge
sos-bash 0.20.0 py_0 conda-forge
sos-notebook 0.24.0 py310hff52083_0 conda-forge
sos-papermill 0.2.1 py_0 conda-forge
sos-pbs 0.20.8 py_0 conda-forge
sos-python 0.18.4 py_0 conda-forge
sos-r 0.19.6 py_0 conda-forge
soupsieve 2.3.2.post1 pyhd8ed1ab_0 conda-forge
sqlalchemy 2.0.10 py310h2372a71_0 conda-forge
stack_data 0.6.2 pyhd8ed1ab_0 conda-forge
statsmodels 0.13.5 py310hde88566_2 conda-forge
sympy 1.11.1 pypyh9d50eac_103 conda-forge
sysroot_linux-64 2.17 h4a8ded7_13 conda-forge
tabulate 0.9.0 pyhd8ed1ab_1 conda-forge
tblib 1.7.0 pyhd8ed1ab_0 conda-forge
tenacity 8.2.2 pyhd8ed1ab_0 conda-forge
terminado 0.17.1 pyh41d4057_0 conda-forge
textwrap3 0.9.2 py_0 conda-forge
threadpoolctl 3.1.0 pyh8a188c0_0 conda-forge
tifffile 2023.4.12 pyhd8ed1ab_0 conda-forge
tinycss2 1.2.1 pyhd8ed1ab_0 conda-forge
tk 8.6.12 h27826a3_0 conda-forge
tktable 2.10 hb7b940f_3 conda-forge
tomli 2.0.1 pyhd8ed1ab_0 conda-forge
toolz 0.12.0 pyhd8ed1ab_0 conda-forge
tornado 6.3 py310h1fa729e_0 conda-forge
tqdm 4.65.0 pyhd8ed1ab_1 conda-forge
traitlets 5.9.0 pyhd8ed1ab_0 conda-forge
typing-extensions 4.5.0 hd8ed1ab_0 conda-forge
typing_extensions 4.5.0 pyha770c72_0 conda-forge
tzdata 2023c h71feb2d_0 conda-forge
tzlocal 4.3 py310hff52083_0 conda-forge
ucx 1.14.0 h8c404fb_1 conda-forge
unicodedata2 15.0.0 py310h5764c6d_0 conda-forge
unixodbc 2.3.10 h583eb01_0 conda-forge
uri-template 1.2.0 pyhd8ed1ab_0 conda-forge
urllib3 1.26.15 pyhd8ed1ab_0 conda-forge
wcwidth 0.2.6 pyhd8ed1ab_0 conda-forge
webcolors 1.13 pyhd8ed1ab_0 conda-forge
webencodings 0.5.1 py_1 conda-forge
websocket-client 1.5.1 pyhd8ed1ab_0 conda-forge
werkzeug 2.2.3 pyhd8ed1ab_0 conda-forge
wheel 0.40.0 pyhd8ed1ab_0 conda-forge
widgetsnbextension 4.0.7 pyhd8ed1ab_0 conda-forge
xlrd 2.0.1 pyhd8ed1ab_3 conda-forge
xorg-kbproto 1.0.7 h7f98852_1002 conda-forge
xorg-libice 1.0.10 h7f98852_0 conda-forge
xorg-libsm 1.2.3 hd9c2040_1000 conda-forge
xorg-libx11 1.8.4 h0b41bf4_0 conda-forge
xorg-libxau 1.0.9 h7f98852_0 conda-forge
xorg-libxdmcp 1.1.3 h7f98852_0 conda-forge
xorg-libxext 1.3.4 h0b41bf4_2 conda-forge
xorg-libxrender 0.9.10 h7f98852_1003 conda-forge
xorg-libxt 1.2.1 h7f98852_2 conda-forge
xorg-renderproto 0.11.1 h7f98852_1002 conda-forge
xorg-xextproto 7.3.0 h0b41bf4_1003 conda-forge
xorg-xproto 7.0.31 h7f98852_1007 conda-forge
xxhash 0.8.1 h0b41bf4_0 conda-forge
xyzservices 2023.2.0 pyhd8ed1ab_0 conda-forge
xz 5.2.6 h166bdaf_0 conda-forge
y-py 0.5.9 py310h4426083_0 conda-forge
yaml 0.2.5 h7f98852_2 conda-forge
yaml-cpp 0.7.0 h27087fc_2 conda-forge
ypy-websocket 0.8.2 pyhd8ed1ab_0 conda-forge
zeromq 4.3.4 h9c3ff4c_1 conda-forge
zfp 1.0.0 h27087fc_3 conda-forge
zict 3.0.0 pyhd8ed1ab_0 conda-forge
zipp 3.15.0 pyhd8ed1ab_0 conda-forge
zlib 1.2.13 h166bdaf_4 conda-forge
zlib-ng 2.0.7 h0b41bf4_0 conda-forge
zstandard 0.19.0 py310hdeb6495_1 conda-forge
zstd 1.5.2 h3eb15da_6 conda-forge

Available kernels:

calysto_bash /opt/conda/share/jupyter/kernels/calysto_bash
ir /opt/conda/share/jupyter/kernels/ir
julia-1.8 /opt/conda/share/jupyter/kernels/julia-1.8
python3 /opt/conda/share/jupyter/kernels/python3
sos /opt/conda/share/jupyter/kernels/sos

BoPeng commented

https://github.com/conda-forge/sos-r-feedstock/pulls?q=is%3Apr+is%3Aclosed

It looks like sos-r 0.20.0 failed to build so it is not available on conda-forge. This has been going on for a while. :-(

If you already have sos-r installed through conda-forge, I think, pip install sos-r -U should update it. The same applies to other packages that might also be outdated. (e.g. sos-notebook is now at 0.24.1).

@BoPeng That did the trick! Thank you!

gaow commented

Here is the list of outdated packages on conda-forge that we would need to fix (based on _version.py so some of them may be up to date eg 0.20.8 on conda-forge -> 0.20.9 in _version.py. But recording them anyways):

(I ordered them by what I think the priority to fix)

gaow commented

Also for SoS notebook the noarch version is only 0.20.* not 0.24.*. That is what got installed on my Mac desktop with M2 chip. ...

gaow commented

There's also this warning message python3.10/site-packages/sos_notebook/kernel.py:19: DeprecationWarning: pkg_resources is deprecated as an API. See https://setuptools.pypa.io/en/latest/pkg_resources.html

BoPeng commented

I will fix this later today.

gaow commented

@BoPeng thank you! Here is another summary of issues related to M2 chip:

โ”œโ”€ jupyterlab-sos 0.9.0**  does not exist (perhaps a typo or a missing channel);
    โ”œโ”€ sos-bash 0.20.0**  is not installable because it requires
    โ”‚  โ””โ”€ calysto_bash, which does not exist (perhaps a missing channel);
    โ”œโ”€ sos-notebook 0.24.0**  does not exist (perhaps a typo or a missing channel);
    โ””โ”€ sos-r 0.19.6**  is not installable because it requires
       โ””โ”€ r-feather, which does not exist (perhaps a missing channel).

We cannot fix the last one i suppose because r-feather does not have arm64 release. For the others we might want to catch-up on conda-forge to also have support for noarch for the latest version.

gaow commented

@BoPeng to touch base on this ticket, we are still having various issues with using new versions of SoS suite on M2 because many of the conda packages are still not noarch, see a list here: #347 (comment). Not sure what it is involved to fix these releases. I can start a new ticket to keep track if it would take longer than simple fixes.