veldsla

gensum

RNA-seq reads to gene counts

xcalibr

**xcalibr** - eXtracting Counting And LInking to Barcode References

faimm

Rust crate that provides random access to indexed fasta using a memory mapped file.

gatk

GATK Official Release Repository

nclist

Rust crate for finding overlapping intervals using a nested containment list

rle_vec

A rust crate providing a vector like struct that stores data as runs of identical values.

veldsla/rle_vec

A rust crate providing a vector like struct that stores data as runs of identical values.

veldsla/faimm

Rust crate that provides random access to indexed fasta using a memory mapped file.

veldsla/nclist

Rust crate for finding overlapping intervals using a nested containment list

veldsla/gatk

GATK Official Release Repository

veldsla/adventofcode

Mostly Rust solutions for the Advent Of Code.

veldsla/fastq-rs

veldsla/filelist

Lazy-evaluating list of files, based on globs or regex patterns

veldsla/flate2-rs

FLATE, Gzip, and Zlib bindings for Rust

veldsla/itertools

Extra iterator adaptors, iterator methods, free functions, and macros.

veldsla/noodles

Bioinformatics I/O libraries in Rust

veldsla/p1pi

Read, store and graph data from a P1 serial port

veldsla/rust-bio

This library provides implementations of many algorithms and data structures that are useful for bioinformatics. All provided implementations are rigorously tested via continuous integration.

veldsla/rust-htslib

This library provides HTSlib bindings and a high level Rust API for reading and writing BAM files.