Pinned Repositories
phenopy
Phenotype comparison tools using semantic similarity.
txt2hpo
Python library for extracting HPO encoded phenotypes from text
AC-PCA
AC-PCA: simultaneously performs dimension reduction and adjustment for confounding variation
AnnotationQuery-pubmed
Experiment using Elsevier Labs' Annotation Query library to query annotations of PubMed articles. The code is in Scala and leverage SPARK processing. The annotations for the articles are extracted from PubTator and Stanford Core NLP.
berkeleytextbooks
Textbooks (EE)CS majors at Berkeley would find helpful
ceia-rl-tournament-starter
Example training/testing scripts for our soccer-twos-env.
DeNovoWEST
iclr19-graph2graph
Learning Multimodal Graph-to-Graph Translation for Molecular Optimization (ICLR 2019)
jdf
Joyner Document Format official
ml_bias
Detection and mitigation of confounding bias in machine learning
vgainullin's Repositories
vgainullin/AC-PCA
AC-PCA: simultaneously performs dimension reduction and adjustment for confounding variation
vgainullin/AnnotationQuery-pubmed
Experiment using Elsevier Labs' Annotation Query library to query annotations of PubMed articles. The code is in Scala and leverage SPARK processing. The annotations for the articles are extracted from PubTator and Stanford Core NLP.
vgainullin/berkeleytextbooks
Textbooks (EE)CS majors at Berkeley would find helpful
vgainullin/ceia-rl-tournament-starter
Example training/testing scripts for our soccer-twos-env.
vgainullin/DeNovoWEST
vgainullin/iclr19-graph2graph
Learning Multimodal Graph-to-Graph Translation for Molecular Optimization (ICLR 2019)
vgainullin/jdf
Joyner Document Format official
vgainullin/ml_bias
Detection and mitigation of confounding bias in machine learning
vgainullin/scipdf_parser
Python PDF parser for scientific publications
vgainullin/sentsci
Scientific sentence tokenizer
vgainullin/soccer-twos-env
A Python package to wrap a compiled soccer-twos reinforcement learning environment with gym-compatible interfaces.
vgainullin/vgainullin.github.io
vgainullin/website
vgainullin/wetlab_server_html