vinibfranc

👨‍💻🧬 Research Assistant (Imperial College London @mrc-ide 🇬🇧) Bioinformatician (MSc & BSc 🇧🇷)‎

Imperial College London (@mrc-ide)London, United Kingdom

Pinned Repositories

mlesky
Language:R9 7 62
mlesky-experiments
Language:R2 6 01
mlscluster
mlscluster: multilevel selection clustering algorithm
Language:R10
BackendPortal_Infobio
Backend of "Portal of Biomedical Informatics" developed in Project Management classes.
Language:Python10
CNN_ImageClassifier
This project consists on a convolutional neural network developed using Keras and TensorFlow to correct classify Lung Cancer and other tumors.
Language:Jupyter Notebook30
DGExamples
Differential Gene Expression examples using main tools available
Language:R10
mlscluster-experiments
Experiments for the mlscluster paper using SARS-CoV-2 data
Language:R00
Syst-Review-COVID19-Prevalence
Data used for "Population-based prevalence surveys during the COVID-19 pandemic: a systematic review" (Franceschi et al., Reviews in Medical Virology, 2020) - https://doi.org/10.1002/rmv.2200
Language:R00
ThePhylogeneticsHandbookPractice
Practical activities proposed in the book "The Phylogenetic Handbook: A Practical Approach to Phylogenetic Analysis and Hypothesis Testing"
Language:Terra20
vinibfranc.github.io
My personal homepage
Language:HTML0 2 00

vinibfranc's Repositories

vinibfranc/CNN_ImageClassifier
This project consists on a convolutional neural network developed using Keras and TensorFlow to correct classify Lung Cancer and other tumors.
Language:Jupyter Notebook30
vinibfranc/ThePhylogeneticsHandbookPractice
Practical activities proposed in the book "The Phylogenetic Handbook: A Practical Approach to Phylogenetic Analysis and Hypothesis Testing"
Language:Terra20
vinibfranc/BackendPortal_Infobio
Backend of "Portal of Biomedical Informatics" developed in Project Management classes.
Language:Python10
vinibfranc/DGExamples
Differential Gene Expression examples using main tools available
Language:R10
vinibfranc/KPC-ID-Resistance-Virulence
Tutorial de análise metagenômica para detecção de patógenos e identificação de genes bacterianos de resistência e virulência em amostras de neuroinfecções
Language:Shell10
vinibfranc/ScriptingTools
ShellScript, Perl and Python Scripts
Language:Python10
vinibfranc/mlesky-experiments
Language:R00
vinibfranc/mlscluster-experiments
Experiments for the mlscluster paper using SARS-CoV-2 data
Language:R00
vinibfranc/Syst-Review-COVID19-Prevalence
Data used for "Population-based prevalence surveys during the COVID-19 pandemic: a systematic review" (Franceschi et al., Reviews in Medical Virology, 2020) - https://doi.org/10.1002/rmv.2200
Language:R00
vinibfranc/vinibfranc.github.io
My personal homepage
Language:HTML0 2 00
vinibfranc/ClusteringParametersEvaluation
Project I - Machine Learning class: Finding the best parameter configuration for K-Means and Agglomerative Clustering using mall customer segmentation data
Language:Jupyter Notebook
vinibfranc/covid19_scenarios
Models of COVID-19 outbreak trajectories and hospital demand
vinibfranc/CursoDataScience
Data Science Course with theoretical and practical (Python and R) classes.
Language:Jupyter Notebook
vinibfranc/DicomMetadataAnalysis
Final paper of Imaging Diagnosis, which consists on extracting DICOM metadata from Computed Tomography scans of patients with suspect of lung cancer.
Language:Jupyter Notebook
vinibfranc/DjangoAndJS
Examples using Django integrated with different JavaScript frontend frameworks
Language:JavaScript
vinibfranc/HIV-ID-GenePredict-Annotation
Tutorial de análise metagenômica para detecção de patógeno viral, predição e anotação funcional de genes em amostra de neuroinfecção.
Language:Shell
vinibfranc/InternshipDEAnalysis
Metarhizium transcriptomic analysis performed during my internship at Cbiot (UFRGS)
Language:HTML
vinibfranc/JSModerno
Learning the JavaScript Language for Web Development.
Language:HTML
vinibfranc/LearningDjango
Python web learning using Django framework.
Language:Python
vinibfranc/mlesky
Language:R
vinibfranc/mysleep_portal
The mySleep project portal, built with yii2 framework and AdminLTE administration theme.
Language:HTML
vinibfranc/ncov
Nextstrain build for novel coronavirus SARS-CoV-2
Language:Python0 0
vinibfranc/NetworkProteinAppend
Paper 2 of the discipline of Computer Networks, whose objective is to implement a client-server application that collects amino acids from the other colleagues through the network to compose the sequence of the Serum albumin protein.
Language:C1 0
vinibfranc/OrthoDEGFinder
Find correspondent genes between species based on DEG data, functional annotation and orthology
Language:JavaScript
vinibfranc/RBasics
R Introduction to Bioinformatics Course done in Curso de Inverno de Genética (2018).
Language:R
vinibfranc/RDataAnalysis
R and Shiny courses and tutorials.
Language:R
vinibfranc/SARS-CoV-2_tools
The published study can be accessed on https://www.mdpi.com/1999-4915/12/12/1414
vinibfranc/shiny_dide
tfpbrowser DIDE shiny server configuration
Language:Shell
vinibfranc/WebDevelopment
Complete Web Development Course (HTML, CSS, JS, PHP and MySQL).
Language:JavaScript
vinibfranc/welcome
:wave::wave::wave: Get started at mrc-ide