Issues
- 0
offsets must be finite values
#48 opened by katsikora - 0
taking into consideration strandedness
#47 opened by RobTesf - 0
detectTSS and detectDiffTSS with parameters for choosing 5'end, 3'end or whole read
#45 opened by fengkuangbaozha - 0
autodetect single-end bam files
#28 opened by vivekbhr - 0
stacked barchart is wrong
#29 opened by vivekbhr - 0
filterDuplicates with `UMI` option
#30 opened by vivekbhr - 1
Update R dependency
#20 opened by vivekbhr - 1
reduce deps
#26 opened by vivekbhr - 0
multicore improvements
#22 opened by vivekbhr - 0
vignette improvements
#23 opened by vivekbhr - 0
sampleinfo setter
#24 opened by vivekbhr - 0
implement tests
#14 opened by vivekbhr - 0
ggsave with NA
#18 opened by vivekbhr - 1
count paired-end
#6 opened by vivekbhr - 0
mapped reads are counted as reads, not fragments
#13 opened by vivekbhr - 0
- 1
- 0
S4 implementation
#8 opened by vivekbhr - 0
calculate FRIT score
#10 opened by vivekbhr - 0
plot read metrics
#11 opened by vivekbhr - 1
- 1
- 1
use summarizeoverlaps
#5 opened by vivekbhr - 1
Move to subjunc for alignment
#1 opened by vivekbhr