Error while compiling lpsymphony
Opened this issue · 3 comments
Hi!
I tried to install this package as a dependency for another one. I am struggling to do so. I have tried with Bioconductor, install.packages from source, from this github - it always fails with the same error.
Before failing it calls MatLab library v617 installation - which I already have installed. Once installation is done (twice) the following errors appear:
<Making install in CoinUtils
make[2]: Entering directory '/tmp/RtmpwyWaDV/R.INSTALL1be31a14ed34/lpsymphony/src/SYMPHONY/CoinUtils'
Making install in src
make[3]: Entering directory '/tmp/RtmpwyWaDV/R.INSTALL1be31a14ed34/lpsymphony/src/SYMPHONY/CoinUtils/src'
make[4]: Entering directory '/tmp/RtmpwyWaDV/R.INSTALL1be31a14ed34/lpsymphony/src/SYMPHONY/CoinUtils/src'
/tmp/RtmpwyWaDV/R.INSTALL1be31a14ed34/lpsymphony/src/SYMPHONY/CoinUtils/install-sh -c -m 644 config_coinutils.h /tmp/RtmpwyWaDV/R.INSTALL1be31a14ed34/lpsymphony/src/SYMPHONY/include/coin/CoinUtilsConfig.h
test -z "/tmp/RtmpwyWaDV/R.INSTALL1be31a14ed34/lpsymphony/src/SYMPHONY/lib64" || mkdir -p -- "/tmp/RtmpwyWaDV/R.INSTALL1be31a14ed34/lpsymphony/src/SYMPHONY/lib64"
/bin/sh ../../libtool --mode=install /home/kselav/bin/install -c 'libCoinUtils.la' '/tmp/RtmpwyWaDV/R.INSTALL1be31a14ed34/lpsymphony/src/SYMPHONY/lib64/libCoinUtils.la'
/home/kselav/bin/install -c .libs/libCoinUtils.lai /tmp/RtmpwyWaDV/R.INSTALL1be31a14ed34/lpsymphony/src/SYMPHONY/lib64/libCoinUtils.la
Preparing installation files ...
Installing ...
Finished
/home/kselav/bin/install -c .libs/libCoinUtils.a /tmp/RtmpwyWaDV/R.INSTALL1be31a14ed34/lpsymphony/src/SYMPHONY/lib64/libCoinUtils.a
Preparing installation files ...
Installing ...
Finished
chmod 644 /tmp/RtmpwyWaDV/R.INSTALL1be31a14ed34/lpsymphony/src/SYMPHONY/lib64/libCoinUtils.a
chmod: cannot access '/tmp/RtmpwyWaDV/R.INSTALL1be31a14ed34/lpsymphony/src/SYMPHONY/lib64/libCoinUtils.a': No such file or directory
make[4]: *** [Makefile:569: install-libLTLIBRARIES] Error 1
make[4]: Leaving directory '/tmp/RtmpwyWaDV/R.INSTALL1be31a14ed34/lpsymphony/src/SYMPHONY/CoinUtils/src'
make[3]: *** [Makefile:796: install-am] Error 2
make[3]: Leaving directory '/tmp/RtmpwyWaDV/R.INSTALL1be31a14ed34/lpsymphony/src/SYMPHONY/CoinUtils/src'
make[2]: *** [Makefile:436: install-recursive] Error 1
make[2]: Leaving directory '/tmp/RtmpwyWaDV/R.INSTALL1be31a14ed34/lpsymphony/src/SYMPHONY/CoinUtils'
make[1]: *** [Makefile:324: install-recursive] Error 1
make[1]: Leaving directory '/tmp/RtmpwyWaDV/R.INSTALL1be31a14ed34/lpsymphony/src/SYMPHONY'
make: *** [Makevars:13: SYMPHONY.ts] Error 2
ERROR: compilation failed for package ‘lpsymphony’
Could you advise how I can solve it (on a server with no root rights, installing to my local user).
Thanks you in advance for any tips.
Hi,
what OS and R version are you using?
Hi, it is openSUSE v 15.0 and R 3.5.1 (I am conservative with R updates due to some work in pipeline that is important to reproduce).
Any updates on this?