vocalpy/vak

Issues

• BUG: `vak.train_classification` throws KeyError when checking for dataset_config["params"]["target_type"]

  #779 opened 2 months ago by henricombrink
  10

• TST: Mock model classes in unit tests for high-level functions, write

  #784 opened 2 months ago by NickleDave
  0

• ENH: Make it possible to specify different splits for datasets

  #749 opened 8 months ago by NickleDave
  0

• chore: fix broken CI

  #783 opened 2 months ago by NickleDave
  0

• DEV/TEST/CI: nox sessions 'tar-generated-test-data' not working as expected

  #764 opened 6 months ago by NickleDave
  0

• ENH: Add extra "expt-tracking" that uses mlflow

  #778 opened 3 months ago by NickleDave
  1

• ENH: `vak.predict` should record which input was used for each prediction

  #777 opened 3 months ago by NickleDave
  0

• CLN: Rename/refactor BioSoundSegBench dataset -> CMACBench

  #776 opened 4 months ago by NickleDave
  1

• ENH: dataset to annotate across multiple folders

  #780 opened 2 months ago by harshidapancholi
  1

• ENH: Add back clipping of splits for learning curves to target durations

  #773 opened 4 months ago by NickleDave
  1

• ENH: Add seed argument to `vak.prep.split` functions

  #775 opened 4 months ago by NickleDave
  0

• BUG: post-processing transform doesn't work with boundary labels

  #767 opened 4 months ago by NickleDave
  0

• ENH: Add functionality to set seed

  #772 opened 4 months ago by NickleDave
  0

• BUG: train_test_dur_split_inds can return indices for training set slightly smaller than target duration

  #771 opened 4 months ago by NickleDave
  0

• BUG: Error with dataset_path parameter in vak eval

  #768 opened 4 months ago by mpescaru
  6

• DEV: Bump lower bound on requires-python to 3.10

  #762 opened 6 months ago by NickleDave
  0

• DEV: Adjust lower/upper bounds on other dependencies

  #763 opened 6 months ago by NickleDave
  0

• MODEL: Add AVN Similarity

  #760 opened 7 months ago by NickleDave
  0

• MODEL: Add Repertoire Embedder

  #759 opened 7 months ago by NickleDave
  0

• MODEL: Add SqueakOut

  #758 opened 7 months ago by NickleDave
  0

• ENH: Add pre-trained model checkpoints

  #756 opened 8 months ago by NickleDave
  0

• ENH: Add datasets module with BioSoundSegBench

  #754 opened 8 months ago by NickleDave
  1

• ENH: Rename `datasets` to `pipes`, that have built-in transforms

  #724 opened 8 months ago by NickleDave
  2

• BUG: Loss and metrics are not logged correctly

  #726 opened 8 months ago by NickleDave
  1

• BUG/CLN: Refactor model abstraction so we don't subclass LightningModel, to fix loss logging

  #737 opened 8 months ago by NickleDave
  2

• BUG: Running lightning with default strategy 'DDP' breaks learncurve function

  #742 opened 8 months ago by NickleDave
  2

• BUG: Predict throws `KeyError`

  #745 opened 8 months ago by avanikop
  2

• Consider switching to keras as engine

  #751 opened 8 months ago by NickleDave
  0

• ENH: Add `dataset` sub-table to config file, remove other dataset/transform param keys

  #748 opened 8 months ago by NickleDave
  1

• ENH: Add segmentation metrics

  #744 opened 8 months ago by NickleDave
  0

• TST/CLN: Add tests for transforms sub-package

  #743 opened 8 months ago by NickleDave
  0

• Out of memory error

  #741 opened 10 months ago by athenasyarifa
  2

• Error running vak prep

  #740 opened 10 months ago by athenasyarifa
  3

• Error when running vak prep train.toml

  #739 opened 10 months ago by harshidapancholi
  6

• BUG: 1. Run the command vak prep gy6or6_train.toml in the terminal

  #738 opened a year ago by cantonsir
  5

• BUG/DOC: Tutorial eval and predict configs missing sections with model names

  #734 opened a year ago by harshidapancholi
  8

• chore: release checklist

  #733 opened a year ago by NickleDave
  0

• Error for duplicate value val_dur in gy6ro6_train.toml from tutorial

  #731 opened a year ago by danielmk
  3

• ENH: check that value for validation step is valid for frame classification models before running learning curve

  #730 opened a year ago by NickleDave
  0

• ENH: Add post-processing transform to remove short silent gaps

  #729 opened a year ago by NickleDave
  0

• CLN: Move `vak.common.trainer` into `frame_classification` / have per-model family trainers

  #728 opened a year ago by NickleDave
  0

• ENH: Have all model families save "best" checkpoint with the same name

  #727 opened a year ago by NickleDave
  0

• BUG: Getting a warning about missing logger directories

  #709 opened a year ago by yardencsGitHub
  2

• BUG: predict raises KeyError when config file is missing `[PREDICT.transform_kwargs]` with `window_size` option

  #725 opened a year ago by wendtalexander
  5

• ENH: Rename `SegmentErrorRate` -> `CharacterErrorRate`

  #721 opened a year ago by NickleDave
  0

• BUG: Fix model families to log train loss on step

  #720 opened a year ago by NickleDave
  0

• ENH: Minimize duplication of data when preparing datasets for frame classification models

  #717 opened a year ago by NickleDave
  1

• ENH: Have `vak.predict` accept `post_tfm_kwargs` like `eval` + `learncurve`

  #714 opened a year ago by NickleDave
  0

• ENH: Require that `metrics` for a model definition be a subclass of `torchmetrics.Metric`

  #707 opened a year ago by NickleDave
  3

• BUG: Getting a warning about Nvidia Tensor Cores

  #708 opened a year ago by yardencsGitHub
  1