Pinned Repositories
cleanlab
The standard data-centric AI package for data quality and machine learning with messy, real-world data and labels.
CudaFsp
CUDA-based implementation of the Finite State Projection (FSP) algorithm.
Documenter.jl
A documentation generator for Julia.
NoisyMeasurementFIM
Study optimal single-cell microscopy experiment design in the presence of measurement errors.
NumCME.jl
Direct solution of the Chemical Master Equation in Julia.
pacmensl
Library for parallel direct solution of the Chemical Master Equation (CME).
pypacmensl
Python wrapper for PACMENSL.
SSIT
StMcmcCme
This repository contains the Python modules and scripts to reproduce the results in the paper "Catanach, Vo, Munsky. IJUQ 2020."
TranslationCUDA
Stochastic simulation of single-cell translation using CUDA-enabled GPUs.
voduchuy's Repositories
voduchuy/NumCME.jl
Direct solution of the Chemical Master Equation in Julia.
voduchuy/NoisyMeasurementFIM
Study optimal single-cell microscopy experiment design in the presence of measurement errors.
voduchuy/pypacmensl
Python wrapper for PACMENSL.
voduchuy/pacmensl
Library for parallel direct solution of the Chemical Master Equation (CME).
voduchuy/StMcmcCme
This repository contains the Python modules and scripts to reproduce the results in the paper "Catanach, Vo, Munsky. IJUQ 2020."
voduchuy/TranslationCUDA
Stochastic simulation of single-cell translation using CUDA-enabled GPUs.
voduchuy/cleanlab
The standard data-centric AI package for data quality and machine learning with messy, real-world data and labels.
voduchuy/CudaFsp
CUDA-based implementation of the Finite State Projection (FSP) algorithm.
voduchuy/Documenter.jl
A documentation generator for Julia.
voduchuy/ExponentialUtilities.jl
Utility functions for exponential integrators for the SciML scientific machine learning ecosystem
voduchuy/FSPCVODE_MEX
Matlab interface with Sundials's CVODES library using Mex to solve ODEs of the form dx/dt = A(t)*x.
voduchuy/Kalb_Vo_2021
This repository contains the code used for the data modeling and analysis presented in Kalb, Vo et al. Scientific Reports 11, 2021.
voduchuy/SSIT
voduchuy/KrylovFspSsa
Fortran implementation of the Krylov-FSP-SSA algorithm for solving the Chemical Master Equation.
voduchuy/NoisyMeasFIMInJulia
voduchuy/numpy
The fundamental package for scientific computing with Python.
voduchuy/OrdinaryDiffEq.jl
High performance ordinary differential equation (ODE) and differential-algebraic equation (DAE) solvers, including neural ordinary differential equations (neural ODEs) and scientific machine learning (SciML)
voduchuy/publicationKeys
Generate word cloud of most frequent words in your papers from pdf files
voduchuy/Vo_2019_ADAMHFSP
Code to reproduce the numerical results in the manuscript, "Bayesian estimation of stochastic gene expression using multifidelity models "Huy D. Vo*, Zachary R. Fox, Ania A. Baetica, Brian E. Munsky.
voduchuy/voduchuy
Readme file for Huy Vo's Github